RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.62
USP47-202ENST00000339865 FCARP24071 287 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 C12orf73Q69YU5 71 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 AMER3Q8N944 861 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 TMEM45BQ96B21 275 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 PHF7Q9BWX1 381 aaPredicted RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 CTSVO60911 334 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 C1QL1O75973 258 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 CBLN1P23435 193 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 CTDSPLO15194 276 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 EML2O95834 649 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 KLKB1P03952 638 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 SRSF5Q13243 272 aaKnown RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 OR4D11Q8NGI4 311 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 MVB12AQ96EY5 273 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 SCNM1Q9BWG6 230 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 MESTQ5EB52 335 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 LY6EQ16553 131 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 NRIP2Q9BQI9 281 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 C6orf106Q9H6K1 298 aaPredicted RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 LCN2P80188 198 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 SLC25A53Q5H9E4 307 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 BHLHA15Q7RTS1 189 aaPredicted RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 MZB1Q8WU39 189 aa11.2□□□□□ -0.62
USP47-202ENST00000339865 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
USP47-202ENST00000339865 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 ANKRD33Q7Z3H0 272 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 MRGPRX3Q96LB0 322 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 SCN4AP35499 1836 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 SCN11AQ9UI33 1791 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 MED13Q9UHV7 2174 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 H0YL77 283 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 SUMO3P55854 103 aaPredicted RBP11.19□□□□□ -0.62
USP47-202ENST00000339865 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 HILPDAQ9Y5L2 63 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 LAMB1P07942 1786 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 IGHV3OR16-10A0A075B7F0 116 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 IGKV6-21A0A0C4DH24 114 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 S1PR2O95136 353 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 TNFSF10P50591 281 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 FGF14Q92915 247 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 CNRIP1Q96F85 164 aaPredicted RBP11.19□□□□□ -0.62
USP47-202ENST00000339865 TNFRSF12AQ9NP84 129 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 MRC1P22897 1456 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 C17orf51A8MQB3 221 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 LHBP01229 141 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 KLHDC9Q8NEP7 349 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 MRGPRX1Q96LB2 322 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 FSCN3Q9NQT6 498 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 FOCADQ5VW36 1801 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 H3BUT2 72 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 LINC01387J3KSC0 135 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 TMEM52BQ4KMG9 183 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 LHFPL4Q7Z7J7 247 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 CTLA4P16410 223 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 CCL7P80098 99 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 OR5AC2Q9NZP5 309 aa11.19□□□□□ -0.62
USP47-202ENST00000339865 A0A1W2PS18 150 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 C9JCJ5 164 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 PLPP3O14495 311 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 HOXD4P09016 255 aaPredicted RBP11.18□□□□□ -0.62
USP47-202ENST00000339865 GZMHP20718 246 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 ZNF345Q14585 488 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 C1orf210Q8IVY1 113 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 WFDC5Q8TCV5 224 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 WDR34Q96EX3 536 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 GVINP1Q7Z2Y8 2422 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 CCL27Q9Y4X3 112 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 A0A1W2PPE3 182 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 ASAH2BP0C7U1 165 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 IL11RAQ14626 422 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 DEGS2Q6QHC5 323 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
USP47-202ENST00000339865 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 CASP8AP2Q9UKL3 1982 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 TDGF1P13385 188 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 MALP21145 153 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 SHISA4Q96DD7 197 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 TMEM106BQ9NUM4 274 aa11.18□□□□□ -0.62
USP47-202ENST00000339865 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
USP47-202ENST00000339865 FAM159AQ6UWV7 190 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 GSN-AS1Q9NRJ2 163 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 SLC25A15Q9Y619 301 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 A0A0B4J2E0 115 aa11.17□□□□□ -0.62
USP47-202ENST00000339865 A0A1B0GX12 115 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms