RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 PKIBQ9C010 78 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 SEBOXQ9HB31 216 aaPredicted RBP13.83□□□□□ -0.2
TRIM9-202ENST00000338969 TNCP24821 2201 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 EDDM3BP56851 147 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 NCR3LG1Q68D85 454 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 Q6ZR03 302 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 H2BFWTQ7Z2G1 175 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 ZNF709Q8N972 641 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 CA5BP1Q8WTZ4 195 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 C5orf30Q96GV9 206 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 GNG12Q9UBI6 72 aa13.83□□□□□ -0.2
TRIM9-202ENST00000338969 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 CLDN34H7C241 214 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 PPIHO43447 177 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 HOXA5P20719 270 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 LRRC75BQ2VPJ9 315 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 GTF3AQ92664 365 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 OR51M1Q9H341 326 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 SPTAN1Q13813 2472 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 PAGE4O60829 102 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 CHRNA7P36544 502 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 C16orf82Q7Z2V1 217 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 OR13A1Q8NGR1 328 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 MLNRO43193 412 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 PTBP3O95758 552 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 TMEM41BQ5BJD5 291 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 SNIP1Q8TAD8 396 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 DTD1Q8TEA8 209 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 ABHD5Q8WTS1 349 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 PATZ1Q9HBE1 687 aaKnown RBP13.82□□□□□ -0.2
TRIM9-202ENST00000338969 AKAP13Q12802 2813 aa13.82□□□□□ -0.2
TRIM9-202ENST00000338969 S100A12P80511 92 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 COL10A1Q03692 680 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 DBX2Q6ZNG2 339 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 TMEM37Q8WXS4 190 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 OPA3Q9H6K4 179 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 A0A1B0GW64 132 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 FCGR3BO75015 233 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 SS18L1O75177 396 aaPredicted RBP13.81□□□□□ -0.2
TRIM9-202ENST00000338969 IFNA1P01562 189 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
TRIM9-202ENST00000338969 TMEM178AQ8NBL3 297 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 OR10P1Q8NGE3 313 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 ABCA4P78363 2273 aa13.81□□□□□ -0.2
TRIM9-202ENST00000338969 CEACAM1P13688 526 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 WT1P19544 449 aaPredicted RBP13.8□□□□□ -0.2
TRIM9-202ENST00000338969 MSMO1Q15800 293 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 ZGRF1Q86YA3 2104 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 OR51G1Q8NGK1 321 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 YPEL4Q96NS1 127 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 PGPEP1LA6NFU8 196 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 FOXF2Q12947 444 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
TRIM9-202ENST00000338969 DEFB108BQ8NET1 73 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 LSM10Q969L4 123 aaKnown RBP13.8□□□□□ -0.2
TRIM9-202ENST00000338969 WASF3Q9UPY6 502 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 CXorf65A6NEN9 183 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 LINC00473A8K010 186 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 IFNA10P01566 189 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 MDS2Q8NDY4 140 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 OR2Z1Q8NG97 314 aa13.8□□□□□ -0.2
TRIM9-202ENST00000338969 CISD1Q9NZ45 108 aaKnown RBP13.8□□□□□ -0.2
TRIM9-202ENST00000338969 C1QTNF9BB2RNN3 333 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 H7BYZ3 331 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 CATR1Q13166 79 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 MOB1BQ7L9L4 216 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 LINC00596Q86U02 117 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 LRRC29Q8WV35 223 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 COQ2Q96H96 371 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 SMDT1Q9H4I9 107 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 SDF2L1Q9HCN8 221 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 SH3BGRL2Q9UJC5 107 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 SMG1Q96Q15 3661 aaKnown RBP13.79□□□□□ -0.2
TRIM9-202ENST00000338969 PSMB3P49720 205 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 RAB24Q969Q5 203 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 TNRC6BQ9UPQ9 1833 aaKnown RBP13.79□□□□□ -0.2
TRIM9-202ENST00000338969 NDUFS6O75380 124 aaKnown RBP13.79□□□□□ -0.2
TRIM9-202ENST00000338969 OPN1MWP04001 364 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 OPN1MW2P0DN77 364 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 OPN1MW3P0DN78 364 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 CD81P60033 236 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 MEF2BQ02080 365 aaPredicted RBP13.79□□□□□ -0.2
TRIM9-202ENST00000338969 MRGPRGQ86SM5 289 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 PCGF1Q9BSM1 259 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 GP6Q9HCN6 339 aa13.79□□□□□ -0.2
TRIM9-202ENST00000338969 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.79□□□□□ -0.2
TRIM9-202ENST00000338969 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
TRIM9-202ENST00000338969 CYB5R3P00387 301 aaPredicted RBP13.78□□□□□ -0.2
TRIM9-202ENST00000338969 SELLP14151 372 aa13.78□□□□□ -0.2
TRIM9-202ENST00000338969 GAMTQ14353 236 aa13.78□□□□□ -0.2
TRIM9-202ENST00000338969 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms