RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 INPP1P49441 399 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 PPP5CP53041 499 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 KLF9Q13886 244 aaPredicted RBP12.31□□□□□ -0.44
SEC13-201ENST00000337354 BAK1Q16611 211 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 AADACL3Q5VUY0 350 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 TRIQKQ629K1 86 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 CMTM1Q8IZ96 169 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 ZNF383Q8NA42 475 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 EAF1Q96JC9 268 aaPredicted RBP12.31□□□□□ -0.44
SEC13-201ENST00000337354 RNF5Q99942 180 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 PRRT1Q99946 306 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 H0YJW9 148 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 M0QZK8 103 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 APOA2P02652 100 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 AMY2AP04746 511 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 RRASP10301 218 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 TMEM11P17152 192 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 CD40LGP29965 261 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 DRAXINQ8NBI3 349 aaPredicted RBP12.3□□□□□ -0.44
SEC13-201ENST00000337354 BVESQ8NE79 360 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 OR4D10Q8NGI6 311 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 OR4C16Q8NGL9 310 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
SEC13-201ENST00000337354 CCDC32Q9BV29 185 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 WDR12Q9GZL7 423 aaKnown RBP12.3□□□□□ -0.44
SEC13-201ENST00000337354 SLC2A8Q9NY64 477 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 C1RLQ9NZP8 487 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 WASHC3Q9Y3C0 194 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 S100GP29377 79 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 CBX3Q13185 183 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 ZNF846Q147U1 533 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 GLDNQ6ZMI3 551 aaPredicted RBP12.3□□□□□ -0.44
SEC13-201ENST00000337354 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 Q8N6K4 173 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 SLC25A33Q9BSK2 321 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
SEC13-201ENST00000337354 H7C2Y5 167 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 GPR31O00270 319 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 FGF16O43320 207 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 IL7P13232 177 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 EIF4EBP1Q13541 118 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 HNF4GQ14541 408 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 ZNF57Q68EA5 555 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 OR4C13Q8NGP0 309 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 DDB2Q92466 427 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 FLYWCH2Q96CP2 140 aaKnown RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 ZNF486Q96H40 463 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 SCGB3A2Q96PL1 93 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 NPFFR1Q9GZQ6 430 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 RANBP3Q9H6Z4 567 aaPredicted RBP12.29□□□□□ -0.44
SEC13-201ENST00000337354 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 MCUBQ9NWR8 336 aa12.29□□□□□ -0.44
SEC13-201ENST00000337354 NAP1L6A6NFF2 107 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 CENPXA8MT69 81 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 LGALS7P47929 136 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 LINC00205P59089 165 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 CATR1Q13166 79 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 OR51S1Q8NGJ8 323 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 FXYD6Q9H0Q3 95 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 MOB4Q9Y3A3 225 aa12.28□□□□□ -0.44
SEC13-201ENST00000337354 FBN1P35555 2871 aaKnown RBP12.27□□□□□ -0.45
SEC13-201ENST00000337354 LINC00473A8K010 186 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 CHST1O43916 411 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 PGLYRP1O75594 196 aaPredicted RBP12.27□□□□□ -0.45
SEC13-201ENST00000337354 TSPAN9O75954 239 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 NDUFA7O95182 113 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 HKR1P10072 659 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 KIR2DS2P43631 304 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 C11orf88Q6PI97 169 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 IDO2Q6ZQW0 420 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.27□□□□□ -0.45
SEC13-201ENST00000337354 POC5Q8NA72 575 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 NPBQ8NG41 125 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 CD300LFQ8TDQ1 290 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 TCTEX1D2Q8WW35 142 aa12.27□□□□□ -0.45
SEC13-201ENST00000337354 C7orf50Q9BRJ6 194 aaKnown RBP12.27□□□□□ -0.45
SEC13-201ENST00000337354 NCBP2LA6PVI3 153 aaKnown RBP12.26□□□□□ -0.45
SEC13-201ENST00000337354 TNFSF12O43508 249 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 PGAM2P15259 253 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
SEC13-201ENST00000337354 RPL30P62888 115 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms