RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 HEPN1Q6WQI6 88 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 NBASA2RRP1 2371 aa12.39□□□□□ -0.43
UBA1-201ENST00000335972 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 A0A1B0GW64 132 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 LRRC30A6NM36 301 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 K7EM74 188 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 TNFSF13O75888 250 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 HBE1P02100 147 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 FGF7P21781 194 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 PRDX2P32119 198 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 ELOBQ15370 118 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
UBA1-201ENST00000335972 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 MOGAT3Q86VF5 341 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 QTRT1Q9BXR0 403 aaKnown RBP12.38□□□□□ -0.43
UBA1-201ENST00000335972 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 AURKAIP1Q9NWT8 199 aaPredicted RBP12.38□□□□□ -0.43
UBA1-201ENST00000335972 PROCRQ9UNN8 238 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
UBA1-201ENST00000335972 HCFC1P51610 2035 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 RNF212Q495C1 297 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 DTD1Q8TEA8 209 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 SARAFQ96BY9 339 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 SMCO3A2RU48 225 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 TMEM210A6NLX4 147 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 CLN5O75503 358 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 IFNA4P05014 189 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 SLC25A6P12236 298 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
UBA1-201ENST00000335972 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 RELNP78509 3460 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 PROP1O75360 226 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 ZNF737O75373 536 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 IFNA17P01571 189 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 GUSBP1Q15486 140 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 SMIM21Q3B7S5 101 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 SLC35E4Q6ICL7 350 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 BHLHA15Q7RTS1 189 aaPredicted RBP12.37□□□□□ -0.43
UBA1-201ENST00000335972 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 TNCP24821 2201 aa12.37□□□□□ -0.43
UBA1-201ENST00000335972 IGKV1D-17A0A075B6S4 117 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 RNF212BA8MTL3 300 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 TRGC2P03986 189 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 COX5AP20674 150 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 S100PBPQ96BU1 408 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 YPEL4Q96NS1 127 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.36□□□□□ -0.43
UBA1-201ENST00000335972 M0R1X1 148 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 PAX6P26367 422 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 CATR1Q13166 79 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 ADIRFQ15847 76 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 WDR25Q64LD2 544 aaPredicted RBP12.36□□□□□ -0.43
UBA1-201ENST00000335972 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 CA5BP1Q8WTZ4 195 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 UNKLQ9H9P5 680 aaKnown RBP12.36□□□□□ -0.43
UBA1-201ENST00000335972 ZNF71Q9NQZ8 489 aaPredicted RBP12.36□□□□□ -0.43
UBA1-201ENST00000335972 UBE2CO00762 179 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 SLC31A2O15432 143 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 GPR12P47775 334 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 FFAR4Q5NUL3 377 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 SPNS3Q6ZMD2 512 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 OR2V2Q96R30 315 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 HSPB7Q9UBY9 170 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 SH3BGRL2Q9UJC5 107 aa12.36□□□□□ -0.43
UBA1-201ENST00000335972 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 S100A9P06702 114 aaKnown RBP12.35□□□□□ -0.43
UBA1-201ENST00000335972 TUBG1P23258 451 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 ZNF134P52741 427 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 MSMO1Q15800 293 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 AP4M1O00189 453 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 AQP7O14520 342 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 UBE2G2P60604 165 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 RTP5Q14D33 572 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 C1orf229Q6ZS94 237 aaPredicted RBP12.35□□□□□ -0.43
UBA1-201ENST00000335972 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 DCAF16Q9NXF7 216 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 ZNRD1Q9P1U0 126 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
UBA1-201ENST00000335972 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
UBA1-201ENST00000335972 MYOD1P15172 320 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
UBA1-201ENST00000335972 TACC2O95359 2948 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 DSCAMO60469 2012 aa12.35□□□□□ -0.43
UBA1-201ENST00000335972 CRYAAP02489 173 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 CDPF1Q6NVV7 123 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms