RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 MOB3BQ86TA1 216 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 OR5AN1Q8NGI8 311 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 SSX3Q99909 188 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 C5orf66Q9H5L9 145 aa14.06□□□□□ -0.16
CHGA-202ENST00000334654 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 H0YJW9 148 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 TNFSF12O43508 249 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 PGLYRP1O75594 196 aaPredicted RBP14.05□□□□□ -0.16
CHGA-202ENST00000334654 CTSDP07339 412 aaPredicted RBP14.05□□□□□ -0.16
CHGA-202ENST00000334654 PGAM2P15259 253 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 CD24P25063 80 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 ECI1P42126 302 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 LRRC75BQ2VPJ9 315 aa14.05□□□□□ -0.16
CHGA-202ENST00000334654 NDUFB6O95139 128 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 IGHV4-59P01825 116 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 CD1BP29016 333 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 RND3P61587 244 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 EBI3Q14213 229 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 PHLDA2Q53GA4 152 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 ZNF66Q6ZN08 573 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 ZFAND1Q8TCF1 268 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 ZNF486Q96H40 463 aaPredicted RBP14.04□□□□□ -0.16
CHGA-202ENST00000334654 SLC25A21Q9BQT8 299 aaPredicted RBP14.04□□□□□ -0.16
CHGA-202ENST00000334654 SLC2A9Q9NRM0 540 aa14.04□□□□□ -0.16
CHGA-202ENST00000334654 VENTXO95231 258 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 THBS3P49746 956 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 SCGB2A2Q13296 93 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 RBMS2Q15434 407 aaKnown RBP14.03□□□□□ -0.16
CHGA-202ENST00000334654 CCBE1Q6UXH8 406 aaPredicted RBP14.03□□□□□ -0.16
CHGA-202ENST00000334654 NRARPQ7Z6K4 114 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 THNSL2Q86YJ6 484 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 ZDHHC22Q8N966 263 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 TMEM230Q96A57 120 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 HSD17B10Q99714 261 aaKnown RBP14.03□□□□□ -0.16
CHGA-202ENST00000334654 ESM1Q9NQ30 184 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 JMJD1CQ15652 2540 aa14.03□□□□□ -0.16
CHGA-202ENST00000334654 FAM240BA0A1B0GVZ2 78 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 H3BUX3 64 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 HOXA3O43365 443 aaPredicted RBP14.02□□□□□ -0.16
CHGA-202ENST00000334654 SNRNP70P08621 437 aaKnown RBP14.02□□□□□ -0.16
CHGA-202ENST00000334654 BRS3P32247 399 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 CMTM1Q8IZ96 169 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 ADAD2Q8NCV1 583 aaKnown RBP14.02□□□□□ -0.16
CHGA-202ENST00000334654 ENKURQ8TC29 256 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 ADTRPQ96IZ2 230 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 RITA1Q96K30 269 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 OCEL1Q9H607 264 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 FLVCR2Q9UPI3 526 aa14.02□□□□□ -0.16
CHGA-202ENST00000334654 TCRBP04435 133 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 RLN1P04808 185 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 RAG2P55895 527 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 PIGPP57054 158 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 PLET1Q6UQ28 207 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 KCTD9Q7L273 389 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 TBC1D26Q86UD7 250 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 Q8N6K4 173 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 SSMEM1Q8WWF3 244 aa14.01□□□□□ -0.17
CHGA-202ENST00000334654 A6NDX4 124 aa14□□□□□ -0.17
CHGA-202ENST00000334654 MPPED1O15442 326 aa14□□□□□ -0.17
CHGA-202ENST00000334654 IGKV1D-33P01593 117 aa14□□□□□ -0.17
CHGA-202ENST00000334654 IGKV1-33P01594 117 aa14□□□□□ -0.17
CHGA-202ENST00000334654 IGKV1-16P04430 117 aa14□□□□□ -0.17
CHGA-202ENST00000334654 F2RP25116 425 aa14□□□□□ -0.17
CHGA-202ENST00000334654 MC5RP33032 325 aa14□□□□□ -0.17
CHGA-202ENST00000334654 ARHGDIBP52566 201 aa14□□□□□ -0.17
CHGA-202ENST00000334654 OR51H1Q8NH63 302 aa14□□□□□ -0.17
CHGA-202ENST00000334654 TCTEX1D2Q8WW35 142 aa14□□□□□ -0.17
CHGA-202ENST00000334654 CAPSLQ8WWF8 208 aa14□□□□□ -0.17
CHGA-202ENST00000334654 EAF1Q96JC9 268 aaPredicted RBP14□□□□□ -0.17
CHGA-202ENST00000334654 SCGB3A2Q96PL1 93 aa14□□□□□ -0.17
CHGA-202ENST00000334654 DPAGT1Q9H3H5 408 aa14□□□□□ -0.17
CHGA-202ENST00000334654 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
CHGA-202ENST00000334654 C14orf166Q9Y224 244 aaKnown RBP14□□□□□ -0.17
CHGA-202ENST00000334654 TCF19Q9Y242 345 aa14□□□□□ -0.17
CHGA-202ENST00000334654 HILS1P60008 231 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
CHGA-202ENST00000334654 SLC9A3R2Q15599 337 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 ABCA11PQ4W5N1 156 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 ZNF585BQ52M93 769 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 MARVELD1Q9BSK0 173 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 POMT1Q9Y6A1 747 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 DNAJC9-AS1A6NH13 148 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 CRYM-AS1A6NIL9 109 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 RAMP3O60896 148 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 FCGR3BO75015 233 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 VSIG10L2P0DP72 767 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 SUPT4H1P63272 117 aaKnown RBP13.99□□□□□ -0.17
CHGA-202ENST00000334654 DHODHQ02127 395 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 LY6EQ16553 131 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 OR2B11Q5JQS5 317 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 PDPNQ86YL7 162 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 LURAP1LQ8IV03 231 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 TMEM86BQ8N661 226 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 OR5R1Q8NH85 324 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 ZNF418Q8TF45 676 aaPredicted RBP13.99□□□□□ -0.17
CHGA-202ENST00000334654 PPP1R14BQ96C90 147 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 PLSCR3Q9NRY6 295 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms