RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 MORN2Q502X0 79 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 TEX36Q5VZQ5 186 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 BTNL3Q6UXE8 466 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 IL34Q6ZMJ4 242 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 BPIFCQ8NFQ6 507 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 NARS2Q96I59 477 aaKnown RBP7.22□□□□□ -1.25
LSAMP-201ENST00000333617 GAFA1Q96PS6 74 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 YPEL2Q96QA6 119 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
LSAMP-201ENST00000333617 EGLN1Q9GZT9 426 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 FAM234AQ9H0X4 552 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 HRH4Q9H3N8 390 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 ZNF665Q9H7R5 613 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 PARP11Q9NR21 331 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 CALYQ9NYX4 217 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 MMP24Q9Y5R2 645 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 TACC2O95359 2948 aa7.22□□□□□ -1.25
LSAMP-201ENST00000333617 TRGV10A0A0A0MS01 117 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 C17orf98A8MV24 154 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 F2RL2O00254 374 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 TXNL1O43396 289 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 SYNGR2O43760 224 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 SCO1O75880 301 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 CST7O76096 145 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 GYPAP02724 150 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 SELLP14151 372 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 PAX9P55771 341 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 TLE1Q04724 770 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 ZNF816Q0VGE8 651 aaPredicted RBP7.21□□□□□ -1.25
LSAMP-201ENST00000333617 OR2B11Q5JQS5 317 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 NCMAPQ5T1S8 102 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 ZNF788Q6ZQV5 615 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 Q6ZRG5 221 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 STX12Q86Y82 276 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 SPAG16Q8N0X2 631 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 HSD17B11Q8NBQ5 300 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 ST6GALNAC3Q8NDV1 305 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 OR5C1Q8NGR4 320 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 CCL13Q99616 98 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 AGMATQ9BSE5 352 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 COA4Q9NYJ1 87 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 WSB1Q9Y6I7 421 aa7.21□□□□□ -1.25
LSAMP-201ENST00000333617 CACNA1AO00555 2505 aa7.21□□□□□ -1.26
LSAMP-201ENST00000333617 KBTBD11-OT1A0A1B0GTJ5 212 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 NKX6-3A6NJ46 265 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 LINC00473A8K010 186 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 SHISA9B4DS77 424 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 FAM90A26D6RGX4 464 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CCL21O00585 134 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TOR1AO14656 332 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 S1PR2O95136 353 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CLDN14O95500 239 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 DANCRP0C864 163 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CGB3P0DN86 165 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CGB7P0DN87 165 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 IAPPP10997 89 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CHRNB4P30926 498 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 G6PCP35575 357 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 SULT1A1P50225 295 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 RAB5CP51148 216 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 F2RL1P55085 397 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 LOXL3P58215 753 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 PJVKQ0ZLH3 352 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 FAM209AQ5JX71 171 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 BTNL8Q6UX41 500 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TGIF2LYQ8IUE0 185 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 ODF3L1Q8IXM7 274 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 C1orf87Q8N0U7 546 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CD300LFQ8TDQ1 290 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 RNASE6Q93091 150 aaKnown RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 SH3BGRL3Q9H299 93 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 SAP30LQ9HAJ7 183 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CLN8Q9UBY8 286 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TRAV38-1A0A0B4J264 116 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM218A2RU14 115 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 FAM90A27PA6NNH2 459 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 B8ZZF3 427 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 E7EQL1 145 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 H3BP45 60 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 RAB29O14966 203 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 DFFBO76075 338 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 KRASP01116 189 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 APOC3P02656 99 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 PRH1P02810 166 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CD3EP07766 207 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 P0C879 139 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 DUTP33316 252 aaKnown RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 RAB7AP51149 207 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TAS2R30P59541 319 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 C17orf58Q2M2W7 97 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 FBXL19-AS1Q494R0 122 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 DUX4L9Q6RFH8 374 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 H2BFWTQ7Z2G1 175 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 ZCCHC24Q8N2G6 241 aaKnown RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM217Q8N7C4 229 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 FAM216BQ8N7L0 139 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 ATP5SQ99766 215 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms