RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 B9A039 149 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 TRGC2P03986 189 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 S100A9P06702 114 aaKnown RBP11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 CECR9P0C854 216 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 NDUFA6P56556 154 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 COL10A1Q03692 680 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 GATAD1Q8WUU5 269 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 ROS1P08922 2347 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 HCFC1P51610 2035 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 IGHV3-13P01766 116 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 IGHV3-7P01780 117 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 SERF2P84101 59 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 TRIP6Q15654 476 aaKnown RBP11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 TMEM41BQ5BJD5 291 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 GFI1BQ5VTD9 330 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 PTPRBP23467 1997 aa11.21□□□□□ -0.61
TUBA1B-201ENST00000332858 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
TUBA1B-201ENST00000332858 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.61
TUBA1B-201ENST00000332858 OOEPA6NGQ2 149 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 TMEM210A6NLX4 147 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 PMS2P5A8MQ11 134 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 TIMM8AO60220 97 aaPredicted RBP11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BKO60814 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BJP06899 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 FABP1P07148 127 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BOP23527 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BBP33778 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BDP58876 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 CD81P60033 236 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BCP62807 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 LOXL4Q96JB6 756 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 SLC25A22Q9H936 323 aa11.21□□□□□ -0.62
TUBA1B-201ENST00000332858 PROP1O75360 226 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 IGHG3P01860 377 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 TFF3Q07654 80 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 OR10G4Q8NGN3 311 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 LHX4Q969G2 390 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 ZNF251Q9BRH9 671 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 MIOXQ9UGB7 285 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 ZNF737O75373 536 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 HOXA5P20719 270 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 EDDM3AQ14507 147 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 MSMPQ1L6U9 139 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 AGMATQ9BSE5 352 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 SLC39A9Q9NUM3 307 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 PIGBOS1A0A0B4J2F0 54 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 RNF212BA8MTL3 300 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 UTF1Q5T230 341 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 WDR25Q64LD2 544 aaPredicted RBP11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 ABHD5Q8WTS1 349 aa11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 OPN3Q9H1Y3 402 aaPredicted RBP11.2□□□□□ -0.62
TUBA1B-201ENST00000332858 ZNF292O60281 2723 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 TRAV20A0A0B4J274 112 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 FAM90A26D6RGX4 464 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 RBMXL2O75526 392 aaKnown RBP11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 GOSR1O95249 250 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 S100A12P80511 92 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 LRP11Q86VZ4 500 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 ZNF610Q8N9Z0 462 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 EDARADDQ8WWZ3 215 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 NINJ1Q92982 152 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 CXXC4Q9H2H0 198 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 VAX2Q9UIW0 290 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 MSRB2Q9Y3D2 182 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 EGR1P18146 543 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 COX5AP20674 150 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 NCR3LG1Q68D85 454 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 MRGPRGQ86SM5 289 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 DTD1Q8TEA8 209 aa11.19□□□□□ -0.62
TUBA1B-201ENST00000332858 SPTBN2O15020 2390 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 SPAARA0A1B0GVQ0 90 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 FRZBQ92765 325 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 GGACTQ9BVM4 153 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 IGHV1-18A0A0C4DH31 117 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 FGF7P21781 194 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 COL8A2P25067 703 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
TUBA1B-201ENST00000332858 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms