RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ALX4Q9H161 411 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 HMGA1P17096 107 aaKnown RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 LILRA5A6NI73 299 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 SRSF4Q08170 494 aaKnown RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 LEAP2Q969E1 77 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 C14orf144Q96I85 54 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 SLIRPQ9GZT3 109 aaKnown RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 TMEM196Q5HYL7 178 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 ZNF414Q96IQ9 312 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 DERL1Q9BUN8 251 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 C12orf73Q69YU5 71 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 KCNS1Q96KK3 526 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 VKORC1L1Q8N0U8 176 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 SPTY2D1-AS1A0A0U1RR47 76 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 HIST1H4AP62805 103 aaKnown RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 CTAG1AP78358 180 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 TMEM240Q5SV17 173 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 DOCK5Q9H7D0 1870 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 NKX2-8O15522 239 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 OR11H7Q8NGC8 314 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 CELA2BP08218 269 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 LCN2P80188 198 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 WIPI2Q9Y4P8 454 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 H3BRM9 83 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-201ENST00000331920 GOLT1AQ6ZVE7 132 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 UCN2Q96RP3 112 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 COX11Q9Y6N1 276 aa14.24□□□□□ -0.13
PTCH1-201ENST00000331920 KNDC1Q76NI1 1749 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 BCL2P10415 239 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 MESTQ5EB52 335 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 LHX9Q9NQ69 397 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 TRGV2A0A075B6R0 118 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 MIC13Q5XKP0 118 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 OR2H1Q9GZK4 316 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 SLC6A13Q9NSD5 602 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 PGFP49763 221 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 CBLN3Q6UW01 205 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 ANAPC13Q9BS18 74 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 S4R3C0 116 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 WNT2BQ93097 391 aa14.23□□□□□ -0.13
PTCH1-201ENST00000331920 NUTF2P61970 127 aaKnown RBP14.23□□□□□ -0.13
PTCH1-201ENST00000331920 TRA2AQ13595 282 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTCH1-201ENST00000331920 MRM2Q9UI43 246 aaKnown RBP14.23□□□□□ -0.13
PTCH1-201ENST00000331920 LOC390937A0A1W2PQ73 354 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 OR11H12B2RN74 326 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 OR11H1Q8NG94 326 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 OR11H2Q8NH07 326 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 MRPL20Q9BYC9 149 aaKnown RBP14.22□□□□□ -0.13
PTCH1-201ENST00000331920 SCGB3A1Q96QR1 104 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 TMEM250H0YL14 139 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 CD69Q07108 199 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 NKG7Q16617 165 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 REPIN1Q9BWE0 567 aaKnown RBP14.22□□□□□ -0.13
PTCH1-201ENST00000331920 MYOFQ9NZM1 2061 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 NPC2P61916 151 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 SAMD13Q5VXD3 122 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 ZNF645Q8N7E2 425 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 LINC01587Q99440 93 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 PEF1Q9UBV8 284 aaKnown RBP14.22□□□□□ -0.13
PTCH1-201ENST00000331920 HPRT1P00492 218 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 MC5RP33032 325 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 RPS11P62280 158 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTCH1-201ENST00000331920 LNP1A1A4G5 178 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 RPS20P60866 119 aaKnown RBP14.22□□□□□ -0.13
PTCH1-201ENST00000331920 MS4A3Q96HJ5 214 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 DLL1O00548 723 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 HOXA5P20719 270 aa14.22□□□□□ -0.13
PTCH1-201ENST00000331920 RPL8P62917 257 aaKnown RBP14.21□□□□□ -0.13
PTCH1-201ENST00000331920 H1FOOQ8IZA3 346 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-201ENST00000331920 MARVELD1Q9BSK0 173 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 TLNRD1Q9H1K6 362 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 HOXA3O43365 443 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-201ENST00000331920 HLA-DQA1P01909 254 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 RIPPLY3P57055 190 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 CD300CQ08708 224 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 ASCL4Q6XD76 172 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.13
PTCH1-201ENST00000331920 TMEM50AO95807 157 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 CRYBB3P26998 211 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 GPHA2Q96T91 129 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 PMCHL2Q9BQD1 86 aa14.21□□□□□ -0.13
PTCH1-201ENST00000331920 CT62P0C5K7 136 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 TMEM45BQ96B21 275 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 SSBP3Q9BWW4 388 aaPredicted RBP14.21□□□□□ -0.14
PTCH1-201ENST00000331920 PDFQ9HBH1 243 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 FLRT3Q9NZU0 649 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 KCNK7Q9Y2U2 307 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 LINC00614P0C842 121 aa14.21□□□□□ -0.14
PTCH1-201ENST00000331920 MYEOVQ96EZ4 313 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 A0A0U1RRA0 63 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 FGF5P12034 268 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 C10orf111Q8N326 155 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 OPN3Q9H1Y3 402 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-201ENST00000331920 SCN11AQ9UI33 1791 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms