RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C18orf65Q6ZTR6 163 aa21.65■■□□□ 1.06
ATPAF1-201ENST00000329231 C8orf86Q6ZUL3 223 aa21.65■■□□□ 1.06
ATPAF1-201ENST00000329231 TSNAXQ99598 290 aaKnown RBP21.65■■□□□ 1.06
ATPAF1-201ENST00000329231 DIABLOQ9NR28 239 aa21.65■■□□□ 1.06
ATPAF1-201ENST00000329231 TRAV18A0A075B6X5 111 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 IGKV1-16P04430 117 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 THBS3P49746 956 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 LINC00205P59089 165 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 RPS16P62249 146 aaKnown RBP21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 UBE2NLQ5JXB2 153 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 ZNF660Q6AZW8 331 aaPredicted RBP21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 FLYWCH2Q96CP2 140 aaKnown RBP21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 RCC1LQ96I51 464 aaKnown RBP21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 WSB1Q9Y6I7 421 aa21.64■■□□□ 1.05
ATPAF1-201ENST00000329231 SPDEFO95238 335 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 IGLL1P15814 213 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 MYCNOSP40205 109 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 RPL5P46777 297 aaKnown RBP21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 TAGLNQ01995 201 aaKnown RBP21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 ETV3LQ6ZN32 361 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 LCNL1Q6ZST4 164 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 SAMD12Q8N8I0 201 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 LINC00482Q8N8I6 264 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 SLC35D1Q9NTN3 355 aa21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 METTL1Q9UBP6 276 aaKnown RBP21.63■■□□□ 1.05
ATPAF1-201ENST00000329231 TRAV41A0A0B4J266 112 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 G3V318 75 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 DUS4LO95620 317 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 PSMB8P28062 276 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 PPIFP30405 207 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 CDX1P47902 265 aaPredicted RBP21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 RORCP51449 518 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 CX3CL1P78423 397 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 PSG5Q15238 335 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 CNIH2Q6PI25 160 aa21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 MRPL41Q8IXM3 137 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 S100A16Q96FQ6 103 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-201ENST00000329231 SSX5O60225 188 aa21.61■■□□□ 1.05
ATPAF1-201ENST00000329231 CBX3Q13185 183 aa21.61■■□□□ 1.05
ATPAF1-201ENST00000329231 TMEM65Q6PI78 240 aa21.61■■□□□ 1.05
ATPAF1-201ENST00000329231 ACOT12Q8WYK0 555 aa21.61■■□□□ 1.05
ATPAF1-201ENST00000329231 FCN1O00602 326 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 REC114Q7Z4M0 266 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 CLVS1Q8IUQ0 354 aaPredicted RBP21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 C5orf30Q96GV9 206 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 ADTRPQ96IZ2 230 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 AUNIPQ9H7T9 357 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 ANXA10Q9UJ72 324 aa21.6■■□□□ 1.05
ATPAF1-201ENST00000329231 XRCC3O43542 346 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 LGALS7P47929 136 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 CRIP2P52943 208 aaPredicted RBP21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 NDPQ00604 133 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 P2RX4Q99571 388 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 NECAP2Q9NVZ3 263 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 OR2W1Q9Y3N9 320 aa21.59■■□□□ 1.05
ATPAF1-201ENST00000329231 CCL24O00175 119 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 IGLV1-40P01703 118 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 RRASP10301 218 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 NFYAP23511 347 aaPredicted RBP21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 LUMP51884 338 aaPredicted RBP21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 TMEM267Q0VDI3 215 aaPredicted RBP21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 RTL8BQ17RB0 113 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 ECSCRQ19T08 205 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 ZNF562Q6V9R5 426 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 MINDY2Q8NBR6 621 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 ABHD5Q8WTS1 349 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 RAB2BQ8WUD1 216 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 CMTM3Q96MX0 182 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 CLCC1Q96S66 551 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 COMMD3Q9UBI1 195 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 SCOCQ9UIL1 159 aa21.58■■□□□ 1.05
ATPAF1-201ENST00000329231 TMBIM6P55061 237 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 FOXB2Q5VYV0 432 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 TCTEX1D1Q8N7M0 179 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 MYOZ3Q8TDC0 251 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 C4orf3Q8WVX3 66 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 AP3S1Q92572 193 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 RAX2Q96IS3 184 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 BCL7BQ9BQE9 202 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 GPR61Q9BZJ8 451 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 FBXO7Q9Y3I1 522 aa21.57■■□□□ 1.04
ATPAF1-201ENST00000329231 SLC25A17O43808 307 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 SLC22A5O76082 557 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 CA2P00918 260 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 HLA-DQB1P01920 261 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 PRB2P02812 416 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 DUTP33316 252 aaKnown RBP21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 ZNF645Q8N7E2 425 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 BVESQ8NE79 360 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 BEST4Q8NFU0 473 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 HARBI1Q96MB7 349 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 MCRIP2Q9BUT9 160 aaKnown RBP21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 KLK15Q9H2R5 256 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 NUBP2Q9Y5Y2 271 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 A3GALT2U3KPV4 340 aa21.56■■□□□ 1.04
ATPAF1-201ENST00000329231 J3QRK9 145 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 APOA1P02647 267 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 ZNF182P17025 639 aaPredicted RBP21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 ARPC4P59998 168 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 TMEM177Q53S58 311 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms