RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 COL8A2P25067 703 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 ECI1P42126 302 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 SURF2Q15527 256 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-202ENST00000324340 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 KCTD9Q7L273 389 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 HIST3H2BBQ8N257 126 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 OR5H2Q8NGV7 314 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 COQ2Q96H96 371 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 GAFA1Q96PS6 74 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 NCOR1P1Q9H4R4 102 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 ZNF665Q9H7R5 613 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 GPR132Q9UNW8 380 aa10.61□□□□□ -0.71
DDX39A-202ENST00000324340 KIR2DS1A0A191URI9 304 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 C13orf42A0A1B0GVH6 325 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 TMEM30CPA0ZSE6 113 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 TRDCB7Z8K6 153 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 MGST3O14880 152 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 ZNF205O95201 554 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 LY86O95711 162 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 VAMP1P23763 118 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 FPR2P25090 351 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 KIR2DS4P43632 304 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 GABRA2P47869 451 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 DLK1P80370 383 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 KIR2DS1Q14954 304 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 ZNRF1Q8ND25 227 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 OR5D13Q8NGL4 314 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 MRGPRFQ96AM1 343 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 RCC1LQ96I51 464 aaKnown RBP10.6□□□□□ -0.71
DDX39A-202ENST00000324340 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
DDX39A-202ENST00000324340 HIPK2Q9H2X6 1198 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 DSCAMO60469 2012 aa10.6□□□□□ -0.71
DDX39A-202ENST00000324340 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
DDX39A-202ENST00000324340 SETXQ7Z333 2677 aaKnown RBP10.59□□□□□ -0.71
DDX39A-202ENST00000324340 A1L4Q6 167 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 GYPAP02724 150 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 TK1P04183 234 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 OR8U9P0C7N5 309 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 NDUFA6P56556 154 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 GAGE1Q13065 139 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 CR1LQ2VPA4 569 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 GPR157Q5UAW9 335 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 RPL7L1Q6DKI1 246 aaKnown RBP10.59□□□□□ -0.71
DDX39A-202ENST00000324340 LHFPL1Q86WI0 220 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 DEFB108BQ8NET1 73 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 OR10D4PQ8NGN7 298 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 OR8U1Q8NH10 309 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 GINS3Q9BRX5 216 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 NECAP2Q9NVZ3 263 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 ROS1P08922 2347 aa10.59□□□□□ -0.71
DDX39A-202ENST00000324340 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-202ENST00000324340 PKDREJQ9NTG1 2253 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 MSGN1A6NI15 193 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 A8MWP6 167 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 M0QZK8 103 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
DDX39A-202ENST00000324340 YIF1AO95070 293 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 DIRAS3O95661 229 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 DAOP14920 347 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 CDKN1AP38936 164 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
DDX39A-202ENST00000324340 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 AESQ08117 197 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-202ENST00000324340 SOHLH1Q5JUK2 328 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 ZNF295-AS1Q8N0V1 137 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 CCL13Q99616 98 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 EHFQ9NZC4 300 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 PITPNC1Q9UKF7 332 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 TRAPPC2LQ9UL33 140 aa10.58□□□□□ -0.72
DDX39A-202ENST00000324340 FLNBO75369 2602 aaKnown RBP10.58□□□□□ -0.72
DDX39A-202ENST00000324340 SMCO3A2RU48 225 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 NPIPB11E5RHQ5 1161 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 K7EPK0 472 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 SDCBPO00560 298 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-202ENST00000324340 GCGP01275 180 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 SCTP09683 121 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 OR5AC1P0C628 307 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 METTL15P1P0C7V9 234 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 OR5H8P0DN80 308 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 RPL12P30050 165 aaKnown RBP10.57□□□□□ -0.72
DDX39A-202ENST00000324340 GLIPR1P48060 266 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 EFNA4P52798 201 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 HERPUD1Q15011 391 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-202ENST00000324340 ETV3LQ6ZN32 361 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 FAM71E2Q8N5Q1 922 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 FAM216BQ8N7L0 139 aa10.57□□□□□ -0.72
DDX39A-202ENST00000324340 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms