RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 IGSF11Q5DX21 431 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 TMEM133Q9H2Q1 129 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 PF4P02776 101 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 POLR2GP62487 172 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCDC149-201ENST00000324309 SRSF6Q13247 344 aaKnown RBP10.8□□□□□ -0.68
CCDC149-201ENST00000324309 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
CCDC149-201ENST00000324309 SERF2P84101 59 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 ZNF345Q14585 488 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 EFNB3Q15768 340 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 IZUMO4Q1ZYL8 232 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 TMEM41BQ5BJD5 291 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 TPRX1Q8N7U7 411 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 DYRK2Q92630 601 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 ZNF837Q96EG3 531 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 NUP214P35658 2090 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 NPBWR2P48146 333 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 OVCH2Q7RTZ1 564 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 SLC25A38Q96DW6 304 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 ZNF430Q9H8G1 570 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 CEBPDP49716 269 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 COX19Q49B96 90 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 H1FOOQ8IZA3 346 aaPredicted RBP10.79□□□□□ -0.68
CCDC149-201ENST00000324309 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 FAM90A9PA6NNJ1 464 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 LMX1BO60663 402 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 CCDC88CQ9P219 2028 aa10.79□□□□□ -0.68
CCDC149-201ENST00000324309 HELTA6NFD8 242 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 CEACAM18A8MTB9 384 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 J3QLI3 93 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 RBFOX2O43251 390 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCDC149-201ENST00000324309 ORM2P19652 201 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 MEOX2P50222 304 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 DYNLT3P51808 116 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 WSB1Q9Y6I7 421 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 TMEM178BH3BS89 294 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 CXorf1O96002 111 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 WNT5AP41221 380 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 FXYD3Q14802 87 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 GGACTQ9BVM4 153 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 NPDC1Q9NQX5 325 aaPredicted RBP10.78□□□□□ -0.68
CCDC149-201ENST00000324309 C12orf77C9JDV5 145 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 ZNF474Q6S9Z5 364 aaPredicted RBP10.78□□□□□ -0.68
CCDC149-201ENST00000324309 A0A0G2JK05 382 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 J3QRE1 110 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 S1PR2O95136 353 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 FAM71F2Q6NXP2 309 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 SLC35E3Q7Z769 313 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 A0A1W2PPE3 182 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 CMC4P56277 68 aaPredicted RBP10.78□□□□□ -0.68
CCDC149-201ENST00000324309 OR4A47Q6IF82 309 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 FAM216BQ8N7L0 139 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 NPAS1Q99742 590 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 MMP26Q9NRE1 261 aa10.78□□□□□ -0.68
CCDC149-201ENST00000324309 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 PSG9Q00887 426 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 ZNRF1Q8ND25 227 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 RXFP4Q8TDU9 374 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 VOPP1Q96AW1 172 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 RSRP1Q9BUV0 290 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 PEMTQ9UBM1 199 aa10.77□□□□□ -0.68
CCDC149-201ENST00000324309 EWSR1Q01844 656 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC149-201ENST00000324309 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 TVP23CQ96ET8 276 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 TMEM177Q53S58 311 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 NCOR1P1Q9H4R4 102 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 CRIM1Q9NZV1 1036 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 SLC25A17O43808 307 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 LRRC75BQ2VPJ9 315 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 HLA-DRB5Q30154 266 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 ZNF497Q6ZNH5 498 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
CCDC149-201ENST00000324309 MEX3AA1L020 520 aaKnown RBP10.76□□□□□ -0.69
CCDC149-201ENST00000324309 MARCH11A6NNE9 402 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 CD1BP29016 333 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 DLK1P80370 383 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
CCDC149-201ENST00000324309 SMIM8Q96KF7 97 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 RABAC1Q9UI14 185 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 TIMM8BQ9Y5J9 83 aaPredicted RBP10.76□□□□□ -0.69
CCDC149-201ENST00000324309 OPN1MWP04001 364 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 OPN1MW2P0DN77 364 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 OPN1MW3P0DN78 364 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 B2MP61769 119 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 Q8TCH9 128 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 RBM14Q96PK6 669 aaKnown RBP10.76□□□□□ -0.69
CCDC149-201ENST00000324309 TSPOP30536 169 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
CCDC149-201ENST00000324309 ZNF90Q03938 601 aa10.76□□□□□ -0.69
CCDC149-201ENST00000324309 ZNF362Q5T0B9 420 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms