RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TCFL5Q9UL49 500 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 IGHV3OR16-10A0A075B7F0 116 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 IL11RAQ14626 422 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 LINC01555Q8NAE3 123 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 ZPLD1Q8TCW7 415 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 TBX21Q9UL17 535 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 COL9A1P20849 921 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 FNDC4Q9H6D8 234 aaPredicted RBP6.87□□□□□ -1.31
CIITA-201ENST00000324288 TNFSF18Q9UNG2 199 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 INSIG2Q9Y5U4 225 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 NDUFA3O95167 84 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 WNT5BQ9H1J7 359 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 NRXN3Q9Y4C0 1643 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 HLA-DRB1P01911 266 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 P2RY6Q15077 328 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 ANKRD33Q7Z3H0 272 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 IGHV1OR21-1A0A087WYE8 117 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 REG1AP05451 166 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 COX6CP09669 75 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 GLULP15104 373 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 WIPI2Q9Y4P8 454 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 TRAV12-3A0A0B4J271 114 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 OR11H4Q8NGC9 324 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 OR4D5Q8NGN0 318 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 GALP22466 123 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 NOVP48745 357 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 CHRNA10Q9GZZ6 450 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 PATJQ8NI35 1801 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 MOSPD3O75425 235 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 GCM2O75603 506 aaPredicted RBP6.87□□□□□ -1.31
CIITA-201ENST00000324288 IGKV3-20P01619 116 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 VDAC1P21796 283 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 SSPNQ14714 243 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 MDP1Q86V88 176 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 RFLNBQ8N5W9 214 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 SPAARA0A1B0GVQ0 90 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 A8MWL6 223 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 CCL21O00585 134 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 TMEM92Q6UXU6 159 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 TIMP4Q99727 224 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 OR2H1Q9GZK4 316 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 NCKAP5O14513 1909 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
CIITA-201ENST00000324288 COL10A1Q03692 680 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
CIITA-201ENST00000324288 TRGC1P0CF51 173 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 MAS1LP35410 378 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 ID1P41134 155 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 MUC21Q5SSG8 566 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 SLC25A10Q9UBX3 287 aaPredicted RBP6.86□□□□□ -1.31
CIITA-201ENST00000324288 ZDHHC8Q9ULC8 765 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 PLXNA1Q9UIW2 1896 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 NIT1Q86X76 327 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 Q8WTZ3 238 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 KCNE1BA0A087WTH5 132 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 CCL4P13236 92 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 SLC25A40Q8TBP6 338 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 WNT16Q9UBV4 365 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 RGPD4Q7Z3J3 1758 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 BCORQ6W2J9 1755 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 CCL3P10147 92 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 SLC25A33Q9BSK2 321 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 SPCS1Q9Y6A9 102 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 IGHV4-39P01824 125 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 ADRA2AP08913 450 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 FCGR2BP31994 310 aaPredicted RBP6.86□□□□□ -1.31
CIITA-201ENST00000324288 RND3P61587 244 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 SLC25A53Q5H9E4 307 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 FAM60AQ9NP50 221 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 JOSD1Q15040 202 aaPredicted RBP6.86□□□□□ -1.31
CIITA-201ENST00000324288 FADS6Q8N9I5 356 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 ABHD14BQ96IU4 210 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CIITA-201ENST00000324288 STRCQ7RTU9 1775 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 IGLV3-25P01717 112 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 C1orf210Q8IVY1 113 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 LINC00470Q9BZP3 86 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 TRAV8-6A0A0B4J262 113 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 A0A0U1RQV5 110 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 IL4P05112 153 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 LY6EQ16553 131 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 C2orf83Q53S99 150 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 OR2V2Q96R30 315 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 LHX9Q9NQ69 397 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 FTH1P19P0C7X4 201 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 FCARP24071 287 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 CCL8P80075 99 aa6.85□□□□□ -1.31
CIITA-201ENST00000324288 DERL1Q9BUN8 251 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms