RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 MSMO1Q15800 293 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 ARSJQ5FYB0 599 aaPredicted RBP15.07■□□□□ 0
PRKCB-202ENST00000321728 WIPI1Q5MNZ9 446 aaPredicted RBP15.07■□□□□ 0
PRKCB-202ENST00000321728 SFRP2Q96HF1 295 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 IMMP1LQ96LU5 166 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 MDFIC2A0A1B0GVS7 189 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 NPIPB11E5RHQ5 1161 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 ZG16O60844 167 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 RBMXL2O75526 392 aaKnown RBP15.07■□□□□ 0
PRKCB-202ENST00000321728 TNFSF13O75888 250 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 COX6A1P12074 109 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 TNFSF10P50591 281 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 SPINK9Q5DT21 86 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 ZDHHC16Q969W1 377 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 APOBEC3DQ96AK3 386 aaPredicted RBP15.07■□□□□ 0
PRKCB-202ENST00000321728 HSPB9Q9BQS6 159 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 PRRG4Q9BZD6 226 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 LPAR2Q9HBW0 351 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 SH2D2AQ9NP31 389 aa15.07■□□□□ 0
PRKCB-202ENST00000321728 USF3Q68DE3 2245 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 RHBDL1O75783 438 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 RFPL3SP0C7P2 107 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 KITLGP21583 273 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 BRS3P32247 399 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 IGFBP7Q16270 282 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 TMEM183BQ1AE95 376 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 VN1R17PQ8TDU5 208 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 C20orf144Q9BQM9 153 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 OR51B6Q9H340 312 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 TRIOBPQ9H2D6 2365 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 LOC102723996A0A087X1L8 192 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 TRAV38-1A0A0B4J264 116 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 RNF212BA8MTL3 300 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 C17orf112F2Z3M2 114 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 F6UZH7 168 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 TMPRSS2O15393 492 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 MRPL33O75394 65 aaKnown RBP15.06■□□□□ 0
PRKCB-202ENST00000321728 GCSAMLQ5JQS6 135 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 DTD1Q8TEA8 209 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 VAMP8Q9BV40 100 aa15.06■□□□□ 0
PRKCB-202ENST00000321728 NBEAQ8NFP9 2946 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 ANKRD30BLA7E2S9 258 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 RBFOX2O43251 390 aaKnown RBP eCLIP15.05■□□□□ 04e-7■□□□□ 9.2
PRKCB-202ENST00000321728 P04436 131 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 UMODP07911 640 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 SELEP16581 610 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 TPTE2P1Q5T6R2 138 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 PRDM6Q9NQX0 595 aa15.05■□□□□ 0
PRKCB-202ENST00000321728 ODAMA1E959 279 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 LRRC30A6NM36 301 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 CBLN1P23435 193 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 CDKN1AP38936 164 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 PAFAH1B2P68402 229 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 OR5I1Q13606 314 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 TEX43Q6ZNM6 134 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 MRPL52Q86TS9 123 aaKnown RBP15.05■□□□□ -0
PRKCB-202ENST00000321728 OR2J1Q9GZK6 312 aa15.05■□□□□ -0
PRKCB-202ENST00000321728 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.05■□□□□ -0
PRKCB-202ENST00000321728 ASPMQ8IZT6 3477 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 PMS2P5A8MQ11 134 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 YPEL1O60688 119 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 GNG3P63215 75 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 ZNF808Q8N4W9 903 aaPredicted RBP15.04■□□□□ -0
PRKCB-202ENST00000321728 YPEL2Q96QA6 119 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 TMEM204Q9BSN7 226 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 MRPS18CQ9Y3D5 142 aaKnown RBP15.04■□□□□ -0
PRKCB-202ENST00000321728 NCKAP5O14513 1909 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 SERF1AO75920 110 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 LINC00614P0C842 121 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 CRISP2P16562 243 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 DMRTA1Q5VZB9 504 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 HLA-CQ95604 372 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 WDR54Q9H977 334 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 TP53TG3Q9ULZ0 132 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 AHCTF1Q8WYP5 2266 aa15.04■□□□□ -0
PRKCB-202ENST00000321728 A0A1W2PPV4 95 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 CRYABP02511 175 aaKnown RBP15.03■□□□□ -0
PRKCB-202ENST00000321728 THBS3P49746 956 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 ZNF90Q03938 601 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 MOB1BQ7L9L4 216 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 BAGE3Q86Y29 109 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 BAGE2Q86Y30 109 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 SAMD10Q9BYL1 202 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 PCED1AQ9H1Q7 454 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 KCNIP2Q9NS61 270 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 R4GN57 208 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 ZNF503-AS2A6NEH8 195 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 EDDM3BP56851 147 aa15.03■□□□□ -0
PRKCB-202ENST00000321728 YPEL3P61236 119 aaPredicted RBP15.03■□□□□ -0
PRKCB-202ENST00000321728 RANP62826 216 aaKnown RBP15.03■□□□□ -0
PRKCB-202ENST00000321728 CCL4P13236 92 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 CA6P23280 308 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 PCP4P48539 62 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 FOXG1P55316 489 aaPredicted RBP15.02■□□□□ -0
PRKCB-202ENST00000321728 Q6P435 159 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 MCEMP1Q8IX19 187 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 OR5AU1Q8NGC0 362 aa15.02■□□□□ -0
PRKCB-202ENST00000321728 TNRC6AQ8NDV7 1962 aaKnown RBP15.02■□□□□ -0
PRKCB-202ENST00000321728 LY6G6EA0A0G2JKS1 128 aa15.02□□□□□ -0.01
PRKCB-202ENST00000321728 S1PR2O95136 353 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms