RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 WFIKKN1Q96NZ8 548 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 CTDSP1Q9GZU7 261 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 PARLQ9H300 379 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 HEYLQ9NQ87 328 aaPredicted RBP8.9□□□□□ -0.99
COL3A1-202ENST00000317840 SPTBN4Q9H254 2564 aa8.9□□□□□ -0.99
COL3A1-202ENST00000317840 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF320A2RRD8 509 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZG16O60844 167 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 DDTP30046 118 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 TNFRSF9Q07011 255 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 COLCA1Q6ZS62 124 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 LURAP1LQ8IV03 231 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 EXPH5Q8NEV8 1989 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 CA5BP1Q8WTZ4 195 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF703Q9H7S9 590 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 CEP192Q8TEP8 1941 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 A0A1B0GV90 55 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF705FA8MVS1 300 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 C17orf112F2Z3M2 114 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 RAMP3O60896 148 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF705DP0CH99 300 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF705BP0CI00 300 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 FAM3BP58499 235 aaPredicted RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 PPP1CBP62140 327 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 Q3ZCU0 254 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 RPP25LQ8N5L8 163 aaKnown RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 OR4X1Q8NH49 305 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM45BQ96B21 275 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 P2RX4Q99571 388 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM147Q9BVK8 224 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 PSG11Q9UQ72 335 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ATRXP46100 2492 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM30CPA0ZSE6 113 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 MBP02144 154 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 SLC25A6P12236 298 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 LHX2P50458 406 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 PKIAP61925 76 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 RNPS1Q15287 305 aaKnown RBP8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF726P1Q15940 193 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 SSX2Q16385 188 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 Q6ZS49 121 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 OR2T10Q8NGZ9 312 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 GATAD1Q8WUU5 269 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 RAB24Q969Q5 203 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 ZDHHC16Q969W1 377 aa8.89□□□□□ -0.99
COL3A1-202ENST00000317840 CTXND1A0A1B0GTU2 59 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 C11orf94C9JXX5 98 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 HAND1O96004 215 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 IGKV1-39P01597 117 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 IGKV1D-39P04432 117 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF883P0CG24 379 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 GCH1P30793 250 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 PLA2G5P39877 138 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 WNT5AP41221 380 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 SSX7Q7RTT5 188 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 Q8IYB0 196 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 LURAP1Q96LR2 239 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 HIST1H2BLQ99880 126 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM204Q9BSN7 226 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 ELOVL1Q9BW60 279 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 C11orf1Q9H5F2 150 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TRAV17A0A0B4J275 112 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 NEURL1O76050 574 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 GPX4P36969 197 aaPredicted RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 CLDN18P56856 261 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 COL10A1Q03692 680 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 PRAMEF5Q5TYX0 476 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 PRAMEF6Q5VXH4 476 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 SLC25A40Q8TBP6 338 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 NEIL1Q96FI4 390 aaPredicted RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 LINC00470Q9BZP3 86 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 COL5A1P20908 1838 aaPredicted RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 KBTBD11O94819 623 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 S1PR2O95136 353 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TFF1P04155 84 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 CDC34P49427 236 aaPredicted RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM18Q96B42 140 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 PATZ1Q9HBE1 687 aaKnown RBP8.88□□□□□ -0.99
COL3A1-202ENST00000317840 PARD6AQ9NPB6 346 aa8.88□□□□□ -0.99
COL3A1-202ENST00000317840 GYPAP02724 150 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 COX5BP10606 129 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 NRN1LQ496H8 165 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 MBD3L1Q8WWY6 194 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 CHD3Q12873 2000 aaKnown RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 WNT9BO14905 357 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 CELA3BP08861 270 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 RNF224P0DH78 156 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 DAZAP2Q15038 168 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ACOT6Q3I5F7 207 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 FBXW9Q5XUX1 488 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms