RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SELLP14151 372 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 NQO2P16083 231 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 RPS16P62249 146 aaKnown RBP17.13■□□□□ 0.33
TTC39C-202ENST00000317571 SLC38A11Q08AI6 406 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 HNF4GQ14541 408 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 SPINK9Q5DT21 86 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 NCR3LG1Q68D85 454 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 SCGB1C1Q8TD33 95 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 MEGF10Q96KG7 1140 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 PSMG3Q9BT73 122 aaPredicted RBP17.13■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF665Q9H7R5 613 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 SEBOXQ9HB31 216 aaPredicted RBP17.13■□□□□ 0.33
TTC39C-202ENST00000317571 ICE1Q9Y2F5 2266 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 TRAV1-1A0A0B4J248 108 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF727A8MUV8 499 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 IGHV3-7P01780 117 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 MAS1LP35410 378 aa17.13■□□□□ 0.33
TTC39C-202ENST00000317571 SPRY3O43610 288 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 IGKV1D-33P01593 117 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 IGKV1-33P01594 117 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 FGF8P55075 233 aaPredicted RBP17.12■□□□□ 0.33
TTC39C-202ENST00000317571 HBG1P69891 147 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 HBG2P69892 147 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 HTD2P86397 168 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 MSMO1Q15800 293 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 LCN15Q6UWW0 184 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 FAM90A1Q86YD7 464 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 C1orf174Q8IYL3 243 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 RAB39BQ96DA2 213 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 RCC1LQ96I51 464 aaKnown RBP17.12■□□□□ 0.33
TTC39C-202ENST00000317571 CEP250Q9BV73 2442 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 LOC102723971A0A1B0GUV8 181 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 CLDN14O95500 239 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 DUX4L9Q6RFH8 374 aaPredicted RBP17.12■□□□□ 0.33
TTC39C-202ENST00000317571 ITLN1Q8WWA0 313 aa17.12■□□□□ 0.33
TTC39C-202ENST00000317571 RBMXL1Q96E39 390 aaKnown RBP17.12■□□□□ 0.33
TTC39C-202ENST00000317571 SPINT2O43291 252 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 HSPB1P04792 205 aaKnown RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 S100A9P06702 114 aaKnown RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 GLRXP35754 106 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 CFHR2P36980 270 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 EIF2S3P41091 472 aaKnown RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF134P52741 427 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 FAM27E3Q08E93 113 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 HEPN1Q6WQI6 88 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 Q8TCH9 128 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 TAF15Q92804 592 aaKnown RBP eCLIP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 MUCL1Q96DR8 90 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 PLCE1Q9P212 2302 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 KLK10O43240 276 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 LHBP01229 141 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 ELLP55199 621 aaPredicted RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF66Q6ZN08 573 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 C1orf229Q6ZS94 237 aaPredicted RBP17.11■□□□□ 0.33
TTC39C-202ENST00000317571 GNG13Q9P2W3 67 aa17.11■□□□□ 0.33
TTC39C-202ENST00000317571 IGLV3-9A0A075B6K5 115 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 HBE1P02100 147 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 DUTP33316 252 aaKnown RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 KLF3P57682 345 aaPredicted RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 LOXL3P58215 753 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 MORN2Q502X0 79 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 MBD3L1Q8WWY6 194 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 PARD6GQ9BYG4 376 aaPredicted RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 HCFC1P51610 2035 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 RP1L1Q8IWN7 2480 aaPredicted RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 DSCAML1Q8TD84 2053 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 RAB29O14966 203 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 CRYAAP02489 173 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF787Q6DD87 383 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 SNX22Q96L94 193 aa17.1■□□□□ 0.33
TTC39C-202ENST00000317571 MRPL37Q9BZE1 423 aaKnown RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 UNKLQ9H9P5 680 aaKnown RBP17.1■□□□□ 0.33
TTC39C-202ENST00000317571 MARCH11A6NNE9 402 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 AP4M1O00189 453 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 ADH4P08319 380 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 OR9G9P0C7N8 305 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 CCKARP32238 428 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 TIMP3P35625 211 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 TAGLN2P37802 199 aaKnown RBP17.09■□□□□ 0.33
TTC39C-202ENST00000317571 NUBP1P53384 320 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 MZT1Q08AG7 82 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 CR1LQ2VPA4 569 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 KHDC3LQ587J8 217 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF429Q86V71 674 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 DTD1Q8TEA8 209 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 HSD17B10Q99714 261 aaKnown RBP17.09■□□□□ 0.33
TTC39C-202ENST00000317571 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 RAI1Q7Z5J4 1906 aaPredicted RBP17.09■□□□□ 0.33
TTC39C-202ENST00000317571 MGST3O14880 152 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 SLC31A2O15432 143 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 CEACAM8P31997 349 aaPredicted RBP17.09■□□□□ 0.33
TTC39C-202ENST00000317571 RAB2AP61019 212 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 RPL39P5Q59GN2 51 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 ACSM6Q6P461 480 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 H2BFWTQ7Z2G1 175 aa17.09■□□□□ 0.33
TTC39C-202ENST00000317571 ZFP92A6NM28 416 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 CLN5O75503 358 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 DLK1P80370 383 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms