RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 EP400Q96L91 3159 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 SIRPB1O00241 398 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TFF2Q03403 129 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DCAF12Q5T6F0 453 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 OR52E5Q8NH55 327 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF331Q9NQX6 463 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 OCIAD1Q9NX40 245 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 FOXJ2Q9P0K8 574 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 HEATR5AQ86XA9 2040 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM30CPA0ZSE6 113 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 ZIC3O60481 467 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 NXPH3O95157 252 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 C1QTNF9P0C862 333 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 P0C879 139 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 WNT5AP41221 380 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 CDKN1BP46527 198 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SELENOVP59797 346 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 ARF1P84077 181 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 RASL11AQ6T310 242 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 NANOS1Q8WY41 292 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 NCOR1P1Q9H4R4 102 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 NRN1Q9NPD7 142 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 IGHV1OR15-9A0A0B4J2B8 117 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 IGHV1-69-2A0A0G2JMI3 117 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 C1QTNF9BB2RNN3 333 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 HSBP1O75506 76 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TOMM40O96008 361 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 AREGP15514 252 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 NPPCP23582 126 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GABRA2P47869 451 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 AARDQ4LEZ3 155 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL14Q6P1L8 145 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 PQLC2Q6ZP29 291 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 MBNL3Q9NUK0 354 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 CD207Q9UJ71 328 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TRAV24A0A0B4J272 114 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 ODAMA1E959 279 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 LINC00869P0C866 280 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 EDN3P14138 238 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GPM6AP51674 278 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 HEYLQ9NQ87 328 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM265A0A087WTH1 108 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 DPRXA6NFQ7 191 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SH2D1BO14796 132 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TIAF1O95411 115 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TNFSF4P23510 183 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 THBS3P49746 956 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TAS2R45P59539 299 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 DAZAP2Q15038 168 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 STUMQ69YW2 141 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 DUSP23Q9BVJ7 150 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV3D-15A0A087WSY6 115 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SELEP16581 610 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 CBLN1P23435 193 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 ADMP35318 185 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 CFHR1Q03591 330 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 C21orf62-AS1Q17RA5 79 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GALMQ96C23 342 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF837Q96EG3 531 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 RAB9BQ9NP90 201 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 B4GALT7Q9UBV7 327 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 IL19Q9UHD0 177 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 PPP1R3CQ9UQK1 317 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SPAG17Q6Q759 2223 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TRAV30A0A087WSZ9 112 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 TRAV9-2A0A087WT02 112 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GRIFINA4D1Z8 144 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GALR2O43603 387 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 RPL31P62899 125 aaKnown RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 SPATA45Q537H7 98 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 MYPOPQ86VE0 399 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-201ENST00000316707 LRP11Q86VZ4 500 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 KCNS1Q96KK3 526 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 IMMP1LQ96LU5 166 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 OR2V2Q96R30 315 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 COMMD5Q9GZQ3 224 aa4.03□□□□□ -1.76
PTPN13-201ENST00000316707 GON4LQ3T8J9 2241 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-201ENST00000316707 IER3P46695 156 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ERVK-16P61578 105 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 CX3CL1P78423 397 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 C12orf54Q6X4T0 127 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 MCEMP1Q8IX19 187 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 OR1L6Q8NGR2 347 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 RLN3Q8WXF3 142 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 OBSL1O75147 1896 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 PMS2P5A8MQ11 134 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 PMCHP20382 165 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 CTRLP40313 264 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 GNG10P50151 68 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 PCOLCEQ15113 449 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 IZUMO4Q1ZYL8 232 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF645Q8N7E2 425 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 EAF1Q96JC9 268 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-201ENST00000316707 NPVFQ9HCQ7 196 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms