RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 GSX1Q9H4S2 264 aaPredicted RBP11.79□□□□□ -0.52
SPAST-201ENST00000315285 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 MMDQ15546 238 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 MIC13Q5XKP0 118 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 OR5P3Q8WZ94 311 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 RTBDNQ9BSG5 229 aaPredicted RBP11.79□□□□□ -0.52
SPAST-201ENST00000315285 FAM117AQ9C073 453 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 C1RLQ9NZP8 487 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 RLFQ13129 1914 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
SPAST-201ENST00000315285 ZIC3O60481 467 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPAST-201ENST00000315285 S1PR2O95136 353 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 APCSP02743 223 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 RTP5Q14D33 572 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 OR8I2Q8N0Y5 310 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 Q8WTZ3 238 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
SPAST-201ENST00000315285 BMPR1BO00238 502 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 ISLRO14498 428 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 RIGQ13278 110 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 FAM222BQ8WU58 562 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 TGIF2-C20orf24A0A0A6YYL0 155 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 HIST1H1BP16401 226 aaKnown RBP11.78□□□□□ -0.52
SPAST-201ENST00000315285 ZNF596Q8TC21 504 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 TMEM45BQ96B21 275 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 CXorf65A6NEN9 183 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 CDK2AP1O14519 115 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 BMI1P35226 326 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 PTGDSP41222 190 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
SPAST-201ENST00000315285 CEACAM18A8MTB9 384 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 ACAA1P09110 424 aaPredicted RBP11.77□□□□□ -0.52
SPAST-201ENST00000315285 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 WDFY1Q8IWB7 410 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 DIRC2Q96SL1 478 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.52
SPAST-201ENST00000315285 NAGKQ9UJ70 344 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 CNOT1A5YKK6 2376 aaKnown RBP11.77□□□□□ -0.52
SPAST-201ENST00000315285 NPIPB7O75200 414 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 GLIPR1P48060 266 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 FADS6Q8N9I5 356 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 LILRB1Q8NHL6 650 aaPredicted RBP11.77□□□□□ -0.52
SPAST-201ENST00000315285 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.52
SPAST-201ENST00000315285 MFAP2P55001 183 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 STPG1Q5TH74 334 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 SSX8Q7RTT4 187 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 VN1R17PQ8TDU5 208 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 HYPMO75409 117 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 LINC00869P0C866 280 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 CALHM1Q8IU99 346 aa11.77□□□□□ -0.53
SPAST-201ENST00000315285 J3QW42 95 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 ZNF837Q96EG3 531 aaPredicted RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 GFI1Q99684 422 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 TIMP4Q99727 224 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 ZNF703Q9H7S9 590 aaPredicted RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 IGLV3-12A0A075B6K2 115 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 TCAPO15273 167 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 SLC35B1P78383 322 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 JPT1Q9UK76 154 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 CARHSP1Q9Y2V2 147 aaKnown RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
SPAST-201ENST00000315285 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 SBF1O95248 1867 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 CBY3A6NI87 242 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 CELA3AP09093 270 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 CACNA1DQ01668 2161 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 GTF2H5Q6ZYL4 71 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 TBX15Q96SF7 602 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 HEATR5BQ9P2D3 2071 aa11.76□□□□□ -0.53
SPAST-201ENST00000315285 F2RL2O00254 374 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 SELENOTP62341 195 aa11.75□□□□□ -0.53
SPAST-201ENST00000315285 FBLN5Q9UBX5 448 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms