RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OR2C3Q8N628 320 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 MALSU1Q96EH3 234 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 CACNG5Q9UF02 275 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 HOXA5P20719 270 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 S100GP29377 79 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 ZNF816Q0VGE8 651 aaPredicted RBP10.38□□□□□ -0.75
RNF4-201ENST00000314289 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 ARV1Q9H2C2 271 aa10.38□□□□□ -0.75
RNF4-201ENST00000314289 GAR1Q9NY12 217 aaKnown RBP10.38□□□□□ -0.75
RNF4-201ENST00000314289 ST8SIA5O15466 376 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 IAPPP10997 89 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 GPX4P36969 197 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 UBE2KP61086 200 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 VAMP2P63027 116 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 NKX6-1P78426 367 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 ZNF585BQ52M93 769 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 GFI1BQ5VTD9 330 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 SPNS3Q6ZMD2 512 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 MOB1BQ7L9L4 216 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 KDF1Q8NAX2 398 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 LEAP2Q969E1 77 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 H3BQ15 152 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 CYB5R3P00387 301 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 CXCL1P09341 107 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 LMO1P25800 156 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 CD40P25942 277 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 GLRXP35754 106 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 CDX1P47902 265 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 CCL8P80075 99 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 HNF4GQ14541 408 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 OR2G3Q8NGZ4 309 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 STRAPQ9Y3F4 350 aaKnown RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 C1QTNF9BB2RNN3 333 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 KRASP01116 189 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 TMEM267Q0VDI3 215 aaPredicted RBP10.37□□□□□ -0.75
RNF4-201ENST00000314289 FGFRL1Q8N441 504 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 OR5C1Q8NGR4 320 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 Q8WTZ3 238 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 NINJ1Q92982 152 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 PSG11Q9UQ72 335 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 RAXQ9Y2V3 346 aa10.37□□□□□ -0.75
RNF4-201ENST00000314289 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 GFRA3O60609 400 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 TMEM252Q8N6L7 170 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 SPIN2AQ99865 258 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 SPIN2BQ9BPZ2 258 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 ASH1LQ9NR48 2969 aaKnown RBP10.36□□□□□ -0.75
RNF4-201ENST00000314289 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 OOEPA6NGQ2 149 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 K7ENP7 123 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 RUNX1Q01196 453 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 SLC35E4Q6ICL7 350 aa10.36□□□□□ -0.75
RNF4-201ENST00000314289 ANKHD1Q8IWZ3 2542 aaKnown RBP10.36□□□□□ -0.75
RNF4-201ENST00000314289 SRRM5B3KS81 715 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 K7N7A8 449 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 CYB5BO43169 146 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 RNF224P0DH78 156 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 G6PCP35575 357 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
RNF4-201ENST00000314289 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 SVEP1Q4LDE5 3571 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 C16orf97H3BN30 126 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 ZNF737O75373 536 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 DYNLT3P51808 116 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 ERVFRD-1P60508 538 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 DLK1P80370 383 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 ID3Q02535 119 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 NHLH1Q02575 133 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 SPINK9Q5DT21 86 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 GPR157Q5UAW9 335 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 C1QL4Q86Z23 238 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 LFNGQ8NES3 379 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 PRO1933Q9H354 126 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 DYSFO75923 2080 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 A0A1B0GV90 55 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 NPIPB11E5RHQ5 1161 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 PAX9P55771 341 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 Q3ZCU0 254 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 C4orf17Q53FE4 359 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 YPEL4Q96NS1 127 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 C11orf1Q9H5F2 150 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 PLEKHF2Q9H8W4 249 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 GFOD1Q9NXC2 390 aa10.35□□□□□ -0.75
RNF4-201ENST00000314289 ARFGEF3Q5TH69 2177 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
RNF4-201ENST00000314289 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 C17orf98A8MV24 154 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 IGHV1-46P01743 117 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 TRGC2P03986 189 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 TNFAIP6P98066 277 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms