RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 OR2D2Q9H210 308 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 PARP11Q9NR21 331 aa11.37□□□□□ -0.59
PPP1CA-201ENST00000312989 TRAV41A0A0B4J266 112 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 M0R1X1 148 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 GSTP1P09211 210 aaKnown RBP11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 ARFRP1Q13795 201 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 OR10J5Q8NHC4 309 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 GNB4Q9HAV0 340 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 NUBP2Q9Y5Y2 271 aa11.36□□□□□ -0.59
PPP1CA-201ENST00000312989 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 I3L521 148 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 SPDEFO95238 335 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 ARL6IP1Q15041 203 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 DCSTAMPQ9H295 470 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 KIAA1456Q9P272 454 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 ZNF221Q9UK13 617 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 ETV7Q9Y603 341 aa11.35□□□□□ -0.59
PPP1CA-201ENST00000312989 LINC00473A8K010 186 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 NUDT19A8MXV4 375 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 H7C2Y5 167 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 K7EIL1 84 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 CCL24O00175 119 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 CA2P00918 260 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 OR5H8P0DN80 308 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 RUNX1Q01196 453 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 REC114Q7Z4M0 266 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 SLC35D1Q9NTN3 355 aa11.34□□□□□ -0.59
PPP1CA-201ENST00000312989 A0A087WXM4 84 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 IGKV1D-13A0A0B4J2D9 117 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 TUSC2O75896 110 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 SCGNO76038 276 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 TNFAIP8O95379 198 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 PTHLHP12272 177 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 RPS19P39019 145 aaKnown RBP11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 PJVKQ0ZLH3 352 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 TMEM177Q53S58 311 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 IDNKQ5T6J7 187 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 ZNF562Q6V9R5 426 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 ST6GALNAC5Q9BVH7 336 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
PPP1CA-201ENST00000312989 SLC25A17O43808 307 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 HLA-DQB1P01920 261 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 NFYAP23511 347 aaPredicted RBP11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 TALDO1P37837 337 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 RAB9AP51151 201 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 GNB1P62873 340 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 ECSCRQ19T08 205 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 CNIH2Q6PI25 160 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 CASTOR1Q8WTX7 329 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 ANXA10Q9UJ72 324 aa11.32□□□□□ -0.6
PPP1CA-201ENST00000312989 A0A0A6YYH2 397 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 A6NJ64 397 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 AIREO43918 545 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 APOA2P02652 100 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 RPS16P62249 146 aaKnown RBP11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 PITPNAQ00169 270 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 BVESQ8NE79 360 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 SNAPC3Q92966 411 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 TSNAXQ99598 290 aaKnown RBP11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 GINS4Q9BRT9 223 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 OR2W1Q9Y3N9 320 aa11.31□□□□□ -0.6
PPP1CA-201ENST00000312989 TRAV18A0A075B6X5 111 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 A0A1W2PN81 502 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 TMEM127O75204 238 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 CHRNA7P36544 502 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 GNG2P59768 71 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 LSM3P62310 102 aaKnown RBP11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 TIMM50Q3ZCQ8 353 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 AKIRIN2Q53H80 203 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 OVCH2Q7RTZ1 564 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 HOGA1Q86XE5 327 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 ZNF645Q8N7E2 425 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms