RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TMEM189A5PLL7 270 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 RPL36A-HNRNPH2H7BZ11 118 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 HTN1P15515 57 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 CKS2P33552 79 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 ZNF83P51522 516 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 ARF6P62330 175 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 HERPUD1Q15011 391 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 P2RY6Q15077 328 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 ZNF764Q96H86 408 aaPredicted RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 PRNDQ9UKY0 176 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 MPC1Q9Y5U8 109 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 NUP205Q92621 2012 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 TRAV39A0A0B4J263 110 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 A0A1W2PRD5 423 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 A0A1W2PRF3 423 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 A0A1W2PRM7 423 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 SNRPCP09234 159 aaKnown RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 H2BFSP57053 126 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 PQLC2Q6ZP29 291 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 C10orf35Q96D05 121 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 NUDT16L1Q9BRJ7 211 aaKnown RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 MIEN1Q9BRT3 115 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 ZNF729A6NN14 1252 aaPredicted RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 FAM157AC9JC47 383 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 IL4P05112 153 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 ZNF124Q15973 351 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 OR6X1Q8NH79 312 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 C14orf144Q96I85 54 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 PGLYRP3Q96LB9 341 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 COA4Q9NYJ1 87 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 AMMECR1Q9Y4X0 333 aaPredicted RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 TRBV5-3A0A0A0MS03 114 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 NDUFS8O00217 210 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 STAG3L3P0CL85 134 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 NANOS3P60323 173 aaKnown RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 TM4SF19Q96DZ7 209 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 SF3B5Q9BWJ5 86 aaKnown RBP7.07□□□□□ -1.28
VPS41-202ENST00000310301 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 CACNA1EQ15878 2313 aa7.07□□□□□ -1.28
VPS41-202ENST00000310301 C7orf71A4D174 169 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 DPRXA6NFQ7 191 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 NPIPB7O75200 414 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 NUDT3O95989 172 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 RNASE1P07998 156 aaKnown RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 APELAP0DMC3 54 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 COX6A1P12074 109 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ATP1A1-AS1Q5TC04 95 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 C1QL3Q5VWW1 255 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 SFTPA2Q8IWL1 248 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ZNF418Q8TF45 676 aaPredicted RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 MS4A5Q9H3V2 200 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ACACAQ13085 2346 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ABCA7Q8IZY2 2146 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 Q8WTZ3 238 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 DERL1Q9BUN8 251 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 UNC13CQ8NB66 2214 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 OR2A4O95047 310 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 CLDN14O95500 239 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 TNFAIP6P98066 277 aaPredicted RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 RALGAPA2Q2PPJ7 1873 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 VAX1Q5SQQ9 334 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ATG4DQ86TL0 474 aaPredicted RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 OR2A7Q96R45 310 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 DLL3Q9NYJ7 618 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ELOVL5Q9NYP7 299 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 IGHV3-21A0A0B4J1V1 117 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 A0A1W2PPV9 198 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 OR4A8P0C604 315 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 RFLNBQ8N5W9 214 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 APCDD1LQ8NCL9 501 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 SSC4DQ8WTU2 575 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 CCL17Q92583 94 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 TMEM45BQ96B21 275 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 QTRT1Q9BXR0 403 aaKnown RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 FAM206AQ9NX38 181 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 OR51B2Q9Y5P1 312 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 TRAV38-1A0A0B4J264 116 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 FCGR3AP08637 254 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 P2RY4P51582 365 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ZBTB34Q8NCN2 500 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 NPVFQ9HCQ7 196 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
VPS41-202ENST00000310301 HIGD1AQ9Y241 93 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 KLHDC2Q9Y2U9 406 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 ARID2Q68CP9 1835 aa7.06□□□□□ -1.28
VPS41-202ENST00000310301 DANCRP0C864 163 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CCL3P10147 92 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 MAS1LP35410 378 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 KIR3DL2P43630 455 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 GZMMP51124 257 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 JOSD1Q15040 202 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 C16orf47Q6ZP98 133 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 BIVMQ86UB2 503 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 C1orf174Q8IYL3 243 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 VSTM2LQ96N03 204 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 NEU1Q99519 415 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 338.8 ms