RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ACTBL2Q562R1 376 aa15.14■□□□□ 0.01
LIME1-201ENST00000309546 OR10J5Q8NHC4 309 aa15.14■□□□□ 0.01
LIME1-201ENST00000309546 TPSG1Q9NRR2 321 aa15.14■□□□□ 0.01
LIME1-201ENST00000309546 SLC35D1Q9NTN3 355 aa15.14■□□□□ 0.01
LIME1-201ENST00000309546 ZNF230Q9UIE0 474 aaPredicted RBP15.14■□□□□ 0.01
LIME1-201ENST00000309546 NUBP2Q9Y5Y2 271 aa15.14■□□□□ 0.01
LIME1-201ENST00000309546 MFNGO00587 321 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 SLC25A17O43808 307 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 SPDEFO95238 335 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 LY86O95711 162 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 OR8U9P0C7N5 309 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 GSTT2P0CG29 244 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 GSTT2BP0CG30 244 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 HIST1H1DP16402 221 aaKnown RBP15.13■□□□□ 0.01
LIME1-201ENST00000309546 SLURP1P55000 103 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 GABARAPL2P60520 117 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 ARFRP1Q13795 201 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 CD200R1LQ6Q8B3 271 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.13■□□□□ 0.01
LIME1-201ENST00000309546 LFNGQ8NES3 379 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 GRPEL2Q8TAA5 225 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 DCUN1D4Q92564 292 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
LIME1-201ENST00000309546 MS4A10Q96PG2 267 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 CABLES2Q9BTV7 478 aa15.13■□□□□ 0.01
LIME1-201ENST00000309546 RAB27BO00194 218 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 OVOL1O14753 267 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 IGHV3-11P01762 117 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 LGALS1P09382 135 aaKnown RBP15.12■□□□□ 0.01
LIME1-201ENST00000309546 RAB6AP20340 208 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 TPPP2P59282 170 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 PYHIN1Q6K0P9 492 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 ZNF562Q6V9R5 426 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 ARPC1AQ92747 370 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 TOLLIPQ9H0E2 274 aa15.12■□□□□ 0.01
LIME1-201ENST00000309546 ZNF256Q9Y2P7 627 aaPredicted RBP15.12■□□□□ 0.01
LIME1-201ENST00000309546 RBM7Q9Y580 266 aaKnown RBP15.12■□□□□ 0.01
LIME1-201ENST00000309546 IGHV4OR15-8A0A075B7B6 117 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 A0A087WW49 117 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 TRBV6-7A0A0A0MS04 114 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 METTL21EPA6NDL7 271 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 LINC01619G3V211 115 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 PSMB9P28065 219 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 CD40LGP29965 261 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 TALDO1P37837 337 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 HARBI1Q96MB7 349 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 GINS4Q9BRT9 223 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 ATG5Q9H1Y0 275 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 SDHAF2Q9NX18 166 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 COL7A1Q02388 2944 aa15.11■□□□□ 0.01
LIME1-201ENST00000309546 SAP30O75446 220 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 INSL3P51460 131 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 CBX3Q13185 183 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 FXYD3Q14802 87 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 AKIRIN2Q53H80 203 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 NR2C2APQ86WQ0 139 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 DLX4Q92988 240 aaPredicted RBP15.1■□□□□ 0.01
LIME1-201ENST00000309546 ZNF355PQ9NSJ1 428 aa15.1■□□□□ 0.01
LIME1-201ENST00000309546 LSM4Q9Y4Z0 139 aaKnown RBP15.1■□□□□ 0.01
LIME1-201ENST00000309546 ARPC1BO15143 372 aaKnown RBP15.09■□□□□ 0.01
LIME1-201ENST00000309546 CNIH1O95406 144 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 TRGV3P03979 118 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 GALP22466 123 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 UBE2UQ5VVX9 321 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 C5orf30Q96GV9 206 aa15.09■□□□□ 0.01
LIME1-201ENST00000309546 ELF5Q9UKW6 265 aaPredicted RBP15.09■□□□□ 0.01
LIME1-201ENST00000309546 MRPS14O60783 128 aaKnown RBP15.08■□□□□ 0
LIME1-201ENST00000309546 ZNF429Q86V71 674 aa15.08■□□□□ 0
LIME1-201ENST00000309546 BVESQ8NE79 360 aa15.08■□□□□ 0
LIME1-201ENST00000309546 SLA2Q9H6Q3 261 aa15.08■□□□□ 0
LIME1-201ENST00000309546 TXNL4BQ9NX01 149 aaKnown RBP15.08■□□□□ 0
LIME1-201ENST00000309546 IGKV1D-8A0A087WSZ0 117 aa15.07■□□□□ 0
LIME1-201ENST00000309546 SHOXO15266 292 aa15.07■□□□□ 0
LIME1-201ENST00000309546 DIRAS3O95661 229 aa15.07■□□□□ 0
LIME1-201ENST00000309546 IGLV2-23P01705 113 aa15.07■□□□□ 0
LIME1-201ENST00000309546 PJVKQ0ZLH3 352 aa15.07■□□□□ 0
LIME1-201ENST00000309546 RTL8BQ17RB0 113 aa15.07■□□□□ 0
LIME1-201ENST00000309546 SPARTQ8N0X7 666 aa15.07■□□□□ 0
LIME1-201ENST00000309546 OR5T1Q8NG75 326 aa15.07■□□□□ 0
LIME1-201ENST00000309546 ASCL2Q99929 193 aa15.07■□□□□ 0
LIME1-201ENST00000309546 Q9H521 79 aa15.07■□□□□ 0
LIME1-201ENST00000309546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.07■□□□□ 0
LIME1-201ENST00000309546 STUB1Q9UNE7 303 aa15.07■□□□□ 0
LIME1-201ENST00000309546 NOTOA8MTQ0 251 aa15.06■□□□□ 0
LIME1-201ENST00000309546 J3QRK9 145 aa15.06■□□□□ 0
LIME1-201ENST00000309546 HSPB1P04792 205 aaKnown RBP15.06■□□□□ 0
LIME1-201ENST00000309546 LGALS7P47929 136 aa15.06■□□□□ 0
LIME1-201ENST00000309546 PITPNAQ00169 270 aa15.06■□□□□ 0
LIME1-201ENST00000309546 ARL6IP1Q15041 203 aa15.06■□□□□ 0
LIME1-201ENST00000309546 H1FOOQ8IZA3 346 aaPredicted RBP15.06■□□□□ 0
LIME1-201ENST00000309546 POC5Q8NA72 575 aa15.06■□□□□ 0
LIME1-201ENST00000309546 FCGR1BQ92637 280 aa15.06■□□□□ 0
LIME1-201ENST00000309546 WWC2-AS2Q96NR7 200 aa15.06■□□□□ 0
LIME1-201ENST00000309546 SORL1Q92673 2214 aa15.05■□□□□ 0
LIME1-201ENST00000309546 SSBP2P81877 361 aaPredicted RBP15.05■□□□□ -0
LIME1-201ENST00000309546 CDNFQ49AH0 187 aa15.05■□□□□ -0
LIME1-201ENST00000309546 TMEM177Q53S58 311 aa15.05■□□□□ -0
LIME1-201ENST00000309546 RHOVQ96L33 236 aa15.05■□□□□ -0
LIME1-201ENST00000309546 ST6GALNAC5Q9BVH7 336 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms