RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CLDND2Q8NHS1 167 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 TCTEX1D2Q8WW35 142 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 RBPMSQ93062 196 aaKnown RBP5.69□□□□□ -1.5
PTCD2-201ENST00000308077 HEXA-AS1Q9H8Q6 139 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 GAB2Q9UQC2 676 aa5.69□□□□□ -1.5
PTCD2-201ENST00000308077 VPS13CQ709C8 3753 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 A0A087X0M5 115 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 A0A1B0GX30 115 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 RNF212BA8MTL3 300 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 H0YIZ8 118 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 M0R1X1 148 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 RGS13O14921 159 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 MPC2O95563 127 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 IFNA21P01568 189 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 PAX1P15863 534 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 ESCO2Q56NI9 601 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 NMSQ5H8A3 153 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 Q8N7P7 452 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF596Q8TC21 504 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 C10orf105Q8TEF2 133 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 IL22RA2Q969J5 263 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 RBMXL1Q96E39 390 aaKnown RBP5.68□□□□□ -1.5
PTCD2-201ENST00000308077 PERPQ96FX8 193 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 HSD17B10Q99714 261 aaKnown RBP5.68□□□□□ -1.5
PTCD2-201ENST00000308077 TMED3Q9Y3Q3 217 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 SESN1Q9Y6P5 492 aa5.68□□□□□ -1.5
PTCD2-201ENST00000308077 LOC105371242A0A075B767 164 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 FXYD6-FXYD2A0A087WZ82 144 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 DUXBA0A1W2PPF3 345 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 VWC2LB2RUY7 222 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 J3QR06 171 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 RAB29O14966 203 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 TSC22D2O75157 780 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 S1PR2O95136 353 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 IGKV1-5P01602 117 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 SERPINE2P07093 398 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 LIPFP07098 398 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 LPAR6P43657 344 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 PAX2Q02962 417 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF816Q0VGE8 651 aaPredicted RBP5.67□□□□□ -1.5
PTCD2-201ENST00000308077 CATR1Q13166 79 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 RAB32Q13637 225 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 IZUMO4Q1ZYL8 232 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 C11orf87Q6NUJ2 197 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 SPAG16Q8N0X2 631 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.67□□□□□ -1.5
PTCD2-201ENST00000308077 OR4D5Q8NGN0 318 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 DDB2Q92466 427 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 FAM168AQ92567 244 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM133Q9H2Q1 129 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 GSKIPQ9P0R6 139 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ONECUT1Q9UBC0 465 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV4-30-2A0A087WSY4 118 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV2-26A0A0B4J1V2 119 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 A8MXK9 166 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ATP6V1G1O75348 118 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 RBP4P02753 201 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 SLC25A4P12235 298 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 VDAC1P21796 283 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 PSMB6P28072 239 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 CYCSP99999 105 aaKnown RBP5.67□□□□□ -1.5
PTCD2-201ENST00000308077 DIAPH2-AS1Q14236 149 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF833PQ6ZTB9 187 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ABHD12Q8N2K0 398 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 LINC00311Q8N616 119 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 C8orf31Q8N9H6 132 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF383Q8NA42 475 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 GPR146Q96CH1 333 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 RAB39BQ96DA2 213 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 PIMREGQ9BSJ6 248 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 RNF126Q9BV68 326 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 GSX2Q9BZM3 304 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
PTCD2-201ENST00000308077 OR5AC2Q9NZP5 309 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 COMMD9Q9P000 198 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 MBD2Q9UBB5 411 aa5.67□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV4-61A0A0C4DH41 118 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 A0A1W2PPH5 198 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 HMSDA8MTL9 139 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 ARPC5O15511 151 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CFDP00746 253 aaPredicted RBP5.66□□□□□ -1.5
PTCD2-201ENST00000308077 MBPP02686 304 aaPredicted RBP5.66□□□□□ -1.5
PTCD2-201ENST00000308077 P0C879 139 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CT45A6P0DMU7 189 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CT45A5P0DMU8 189 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CT45A7P0DMV0 189 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 LYL1P12980 280 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 RPA2P15927 270 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 ARF6P62330 175 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 LCN2P80188 198 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 FGL1Q08830 312 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CLEC2AQ6UVW9 174 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 Q6ZRM9 215 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 TCTEX1D1Q8N7M0 179 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 OR9G1Q8NH87 305 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 LSM10Q969L4 123 aaKnown RBP5.66□□□□□ -1.5
PTCD2-201ENST00000308077 FAM212BQ9NTI7 297 aaPredicted RBP5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CRYBG3Q68DQ2 2970 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms