RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 BAXQ07812 192 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ARL16Q0P5N6 197 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 TMEM267Q0VDI3 215 aaPredicted RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 PJVKQ0ZLH3 352 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CATR1Q13166 79 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CT45A1Q5HYN5 189 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ATRAIDQ6UW56 229 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 Q6ZRG5 221 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 HAPLN4Q86UW8 402 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CT45A3Q8NHU0 189 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 EDARADDQ8WWZ3 215 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 FAM234AQ9H0X4 552 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 FAM212BQ9NTI7 297 aaPredicted RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 CACFD1Q9UGQ2 172 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.4□□□□□ -1.54
USP47-201ENST00000305481 A0A1W2PPE3 182 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 MED19A0JLT2 244 aaPredicted RBP5.4□□□□□ -1.54
USP47-201ENST00000305481 TMEM218A2RU14 115 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 TMEM178BH3BS89 294 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 TOR1AO14656 332 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 TNFRSF13BO14836 293 aaPredicted RBP5.4□□□□□ -1.54
USP47-201ENST00000305481 TMPRSS2O15393 492 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 MMP23AO75900 390 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 IRF2P14316 349 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 ATP6V0CP27449 155 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 GPR12P47775 334 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 ERVFRD-1P60508 538 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 IL34Q6ZMJ4 242 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 RBMXL1Q96E39 390 aaKnown RBP5.4□□□□□ -1.54
USP47-201ENST00000305481 TMEM231Q9H6L2 316 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 SAP30LQ9HAJ7 183 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 FAM96BQ9Y3D0 163 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 TANC2Q9HCD6 1990 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 PIEZO1Q92508 2521 aa5.4□□□□□ -1.54
USP47-201ENST00000305481 LINC00587B1AMM8 73 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 APOC3P02656 99 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 SULT1A1P50225 295 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 TNFRSF9Q07011 255 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 ZNF266Q14584 549 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 CYB5R2Q6BCY4 276 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 ZNF439Q8NDP4 499 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 TSNAXQ99598 290 aaKnown RBP5.4□□□□□ -1.55
USP47-201ENST00000305481 ABHD14AQ9BUJ0 271 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 NGBQ9NPG2 151 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 GFOD1Q9NXC2 390 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 HSPB7Q9UBY9 170 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 ARFGEF3Q5TH69 2177 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 ANKHD1Q8IWZ3 2542 aaKnown RBP5.4□□□□□ -1.55
USP47-201ENST00000305481 TRGV10A0A0A0MS01 117 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 LRRC30A6NM36 301 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 NUDT19A8MXV4 375 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 C9JQL5 133 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 AGPAT2O15120 278 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 M6PRP20645 277 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 CHRNB4P30926 498 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 CASP6P55212 293 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 UBE2KP61086 200 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 RPL23AP62750 156 aaKnown RBP5.4□□□□□ -1.55
USP47-201ENST00000305481 BLOC1S1P78537 153 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 RUNX1Q01196 453 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 TCTEX1D1Q8N7M0 179 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 CCL17Q92583 94 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 CORO2AQ92828 525 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 NARS2Q96I59 477 aaKnown RBP5.4□□□□□ -1.55
USP47-201ENST00000305481 SCRT1Q9BWW7 348 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 RBKSQ9H477 322 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 PSENENQ9NZ42 101 aa5.4□□□□□ -1.55
USP47-201ENST00000305481 HRNRQ86YZ3 2850 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 FAM90A26D6RGX4 464 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 M0R1X1 148 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 NUPL2O15504 423 aaKnown RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 FCGR3BO75015 233 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 METTL15P1P0C7V9 234 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 F2RL1P55085 397 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 LYPD2Q6UXB3 125 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 TMEM182Q6ZP80 229 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 DDB2Q92466 427 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ATP5SQ99766 215 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ZNF251Q9BRH9 671 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 C19orf12Q9NSK7 152 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 TMEM106BQ9NUM4 274 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 FAM157AC9JC47 383 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ITGB1BP1O14713 200 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 CD5P06127 495 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 APOBEC3AP31941 199 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 TAS2R30P59541 319 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 LY6DQ14210 128 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 C10orf91Q5T1B1 145 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 FAM216AQ8WUB2 273 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 EGLN1Q9GZT9 426 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 ZNRD1Q9P1U0 126 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 COL6A6A6NMZ7 2263 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 CACNA1AO00555 2505 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 PPIAL4EA0A075B759 164 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 SAA2-SAA4A0A096LPE2 208 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 TRAV38-1A0A0B4J264 116 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms