RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZNF251Q9BRH9 671 aa18.32■□□□□ 0.52
SMAD1-201ENST00000302085 COA4Q9NYJ1 87 aa18.32■□□□□ 0.52
SMAD1-201ENST00000302085 FSTL3O95633 263 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 IGHV2-70P01814 119 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 GNG10P50151 68 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 TMEM252Q8N6L7 170 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 CD300LFQ8TDQ1 290 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 TMED6Q8WW62 240 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 SAA2-SAA4A0A096LPE2 208 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 JTBO76095 146 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 ATG12O94817 140 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 SAA2P0DJI9 122 aaPredicted RBP18.31■□□□□ 0.52
SMAD1-201ENST00000302085 EIF5AP63241 154 aaKnown RBP18.31■□□□□ 0.52
SMAD1-201ENST00000302085 MIDNQ504T8 468 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 HEPN1Q6WQI6 88 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.31■□□□□ 0.52
SMAD1-201ENST00000302085 LPAR3Q9UBY5 353 aa18.31■□□□□ 0.52
SMAD1-201ENST00000302085 RAB29O14966 203 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 FCGR3BO75015 233 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 LY6HO94772 140 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 MRPS11P82912 194 aaKnown RBP18.3■□□□□ 0.52
SMAD1-201ENST00000302085 SLC25A48Q6ZT89 311 aaKnown RBP18.3■□□□□ 0.52
SMAD1-201ENST00000302085 LYG1Q8N1E2 194 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 DDB2Q92466 427 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 MED9Q9NWA0 146 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 SYNGR2O43760 224 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 DTX2Q86UW9 622 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 RAB40CQ96S21 281 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 REG4Q9BYZ8 158 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 SLC25A31Q9H0C2 315 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 ARV1Q9H2C2 271 aa18.3■□□□□ 0.52
SMAD1-201ENST00000302085 TOR1AO14656 332 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 FAM157CP0CG43 387 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 DLX6P56179 175 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 UBAC2Q8NBM4 344 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 ZNRD1Q9P1U0 126 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 LAMP3Q9UQV4 416 aa18.29■□□□□ 0.52
SMAD1-201ENST00000302085 FGF16O43320 207 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 DAOP14920 347 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 AVPI1Q5T686 147 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 ZNF841Q6ZN19 808 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 BARX1Q9HBU1 254 aaPredicted RBP18.28■□□□□ 0.52
SMAD1-201ENST00000302085 IGSF10Q6WRI0 2623 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 RBFOX2O43251 390 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMAD1-201ENST00000302085 HPRT1P00492 218 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 TMEM155Q4W5P6 130 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 H2BFWTQ7Z2G1 175 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 R3HDM4Q96D70 268 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 S1PR3Q99500 378 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.28■□□□□ 0.52
SMAD1-201ENST00000302085 PLA2G2EQ9NZK7 142 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 PRELID3BQ9Y3B1 194 aa18.28■□□□□ 0.52
SMAD1-201ENST00000302085 TEX46H3BTG2 121 aa18.27■□□□□ 0.52
SMAD1-201ENST00000302085 IGFBP2P18065 325 aa18.27■□□□□ 0.52
SMAD1-201ENST00000302085 NEU4Q8WWR8 484 aaPredicted RBP18.27■□□□□ 0.52
SMAD1-201ENST00000302085 BORCS7-ASMTA0A0B4J1R7 106 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 MARCH11A6NNE9 402 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 FAM90A26D6RGX4 464 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 TXNL1O43396 289 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 CST7O76096 145 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 IAPPP10997 89 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 RPL23AP62750 156 aaKnown RBP18.26■□□□□ 0.51
SMAD1-201ENST00000302085 ZNF383Q8NA42 475 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 HSPB7Q9UBY9 170 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 RALYQ9UKM9 306 aaKnown RBP18.26■□□□□ 0.51
SMAD1-201ENST00000302085 CACNA1BQ00975 2339 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 MFSD2BA6NFX1 497 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 KIR2DS2P43631 304 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 AANATQ16613 207 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 SMIM8Q96KF7 97 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 RBKSQ9H477 322 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 PFDN2Q9UHV9 154 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 WSB1Q9Y6I7 421 aa18.26■□□□□ 0.51
SMAD1-201ENST00000302085 H3BP45 60 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 FBXO24O75426 580 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 THBS3P49746 956 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 UBE2KP61086 200 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 TNFRSF9Q07011 255 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 C11orf42Q8N5U0 333 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 RNF141Q8WVD5 230 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 PSENENQ9NZ42 101 aa18.25■□□□□ 0.51
SMAD1-201ENST00000302085 DYNLT3P51808 116 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 BAXQ07812 192 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 CLINT1Q14677 625 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 EIF5AL1Q6IS14 154 aaKnown RBP18.24■□□□□ 0.51
SMAD1-201ENST00000302085 GINS3Q9BRX5 216 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 USP24Q9UPU5 2620 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 TRBV23-1A0A0A0MS06 115 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 LRRC20Q8TCA0 184 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 ADTRPQ96IZ2 230 aa18.24■□□□□ 0.51
SMAD1-201ENST00000302085 CFAP46Q8IYW2 2715 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 OR9G9P0C7N8 305 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 CT45A6P0DMU7 189 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 CT45A5P0DMU8 189 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 CT45A7P0DMV0 189 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 TAS2R30P59541 319 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 TMEM217Q8N7C4 229 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 OR5C1Q8NGR4 320 aa18.23■□□□□ 0.51
SMAD1-201ENST00000302085 HRNRQ86YZ3 2850 aaPredicted RBP18.23■□□□□ 0.51
SMAD1-201ENST00000302085 TMEM267Q0VDI3 215 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms