RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 DEFA3P59666 94 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 MZT2BQ6NZ67 158 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 ZNF66Q6ZN08 573 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 KCTD9Q7L273 389 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 RTBDNQ9BSG5 229 aaPredicted RBP22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 PALMDQ9NP74 551 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 H0YJW9 148 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 PGLYRP1O75594 196 aaPredicted RBP22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 NDUFB6O95139 128 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 RLN1P04808 185 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 SLC6A1P30531 599 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 ABCA11PQ4W5N1 156 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 FBLN7Q53RD9 439 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 POC5Q8NA72 575 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 OR5AN1Q8NGI8 311 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 DDB2Q92466 427 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 ADTRPQ96IZ2 230 aa22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 C14orf166Q9Y224 244 aaKnown RBP22.28■■□□□ 1.16
CHCHD4-201ENST00000295767 FAM90A9PA6NNJ1 464 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 PIGPP57054 158 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 DCTN2Q13561 401 aaKnown RBP22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 RBMS3Q6XE24 437 aaKnown RBP22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 ZDHHC22Q8N966 263 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 TCTEX1D2Q8WW35 142 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 CAPSLQ8WWF8 208 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 SCGB3A2Q96PL1 93 aa22.27■■□□□ 1.16
CHCHD4-201ENST00000295767 HOXA3O43365 443 aaPredicted RBP22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 VENTXO95231 258 aa22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 SNRNP70P08621 437 aaKnown RBP22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 CD1BP29016 333 aa22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 RND3P61587 244 aa22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 OR51H1Q8NH63 302 aa22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 DPAGT1Q9H3H5 408 aa22.26■■□□□ 1.15
CHCHD4-201ENST00000295767 IGKV1D-33P01593 117 aa22.25■■□□□ 1.15
CHCHD4-201ENST00000295767 IGKV1-33P01594 117 aa22.25■■□□□ 1.15
CHCHD4-201ENST00000295767 TBC1D26Q86UD7 250 aa22.25■■□□□ 1.15
CHCHD4-201ENST00000295767 SSMEM1Q8WWF3 244 aa22.25■■□□□ 1.15
CHCHD4-201ENST00000295767 FAM240BA0A1B0GVZ2 78 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 APOA2P02652 100 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 S100GP29377 79 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 CATR1Q13166 79 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 OR2B11Q5JQS5 317 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 ZNF418Q8TF45 676 aaPredicted RBP22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 SLC35D1Q9NTN3 355 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 COPZ2Q9P299 210 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 FLVCR2Q9UPI3 526 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 WASHC3Q9Y3C0 194 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 H7C2Y5 167 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 MC5RP33032 325 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 CCDC71LQ8N9Z2 235 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 ADAD2Q8NCV1 583 aaKnown RBP22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 TNFRSF19Q9NS68 423 aa22.24■■□□□ 1.15
CHCHD4-201ENST00000295767 TCRBP04435 133 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 HES1Q14469 280 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 LY6EQ16553 131 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 NRARPQ7Z6K4 114 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 TMED4Q7Z7H5 227 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 THNSL2Q86YJ6 484 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 TMEM230Q96A57 120 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 DUX5Q96PT3 197 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 ESM1Q9NQ30 184 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 TCF19Q9Y242 345 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 PRELID3BQ9Y3B1 194 aa22.23■■□□□ 1.15
CHCHD4-201ENST00000295767 RNF212BA8MTL3 300 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 MPPED1O15442 326 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 FAM106CPP0CH98 169 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 BRWD1-AS2P59051 145 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 OR5R1Q8NH85 324 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 ENKURQ8TC29 256 aa22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 EAF1Q96JC9 268 aaPredicted RBP22.22■■□□□ 1.15
CHCHD4-201ENST00000295767 DNAJC9-AS1A6NH13 148 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 FCGR3BO75015 233 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 IGKV1-16P04430 117 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 F2RP25116 425 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 TAGLNQ01995 201 aaKnown RBP22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 EBI3Q14213 229 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 CCBE1Q6UXH8 406 aaPredicted RBP22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 PDPNQ86YL7 162 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 C20orf85Q9H1P6 137 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 CUBNO60494 3623 aa22.21■■□□□ 1.15
CHCHD4-201ENST00000295767 BTBD17A6NE02 478 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 ARPC1BO15143 372 aaKnown RBP22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 HILS1P60008 231 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 HNF4GQ14541 408 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 RTL8BQ17RB0 113 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 CENPSQ8N2Z9 138 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 OR2T10Q8NGZ9 312 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 LIN7CQ9NUP9 197 aaKnown RBP22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 POMT1Q9Y6A1 747 aa22.2■■□□□ 1.15
CHCHD4-201ENST00000295767 MOSP00540 346 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 TMEM11P17152 192 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 AKR1C4P17516 323 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 SLC9A3R2Q15599 337 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 TMEM219Q86XT9 240 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 SPAG16Q8N0X2 631 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 RITA1Q96K30 269 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 NUDT15Q9NV35 164 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 VPREB3Q9UKI3 123 aa22.2■■□□□ 1.14
CHCHD4-201ENST00000295767 A6NDX4 124 aa22.19■■□□□ 1.14
CHCHD4-201ENST00000295767 RAMP3O60896 148 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms