RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 QTRT1Q9BXR0 403 aaKnown RBP8.65□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
CLDN1-201ENST00000295522 MTCH1Q9NZJ7 389 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 OR1A1Q9P1Q5 309 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 CFAP54Q96N23 3096 aa8.65□□□□□ -1.02
CLDN1-201ENST00000295522 BLACEA4D250 179 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.03
CLDN1-201ENST00000295522 PRSS47A8MTI9 375 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 PDLIM3Q53GG5 364 aaPredicted RBP8.65□□□□□ -1.03
CLDN1-201ENST00000295522 MMD2Q8IY49 270 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 OR10G3Q8NGC4 313 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 OR2Y1Q8NGV0 311 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 LMX1AQ8TE12 382 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 CLDN23Q96B33 292 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.03
CLDN1-201ENST00000295522 DHHO43323 396 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 APOA2P02652 100 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 CCL2P13500 99 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 G6PCP35575 357 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 HYAL1Q12794 435 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 RPEL1Q2QD12 228 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 NIT1Q86X76 327 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 AP1S3Q96PC3 154 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 HSPB7Q9UBY9 170 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ATP23Q9Y6H3 246 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 MAP1BP46821 2468 aaKnown RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 KIAA1549Q9HCM3 1950 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ADAMTS9Q9P2N4 1935 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 IGHV2-70DA0A0C4DH43 119 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 TOX4O94842 621 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 LINC00271P0C7V0 271 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 TCTAP57738 103 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 SLC24A4Q8NFF2 622 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 CRIM1Q9NZV1 1036 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 K7EP13 123 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 M0R2Z0 102 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 LINC01565O15544 149 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 SNAI2O43623 268 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 PDE6DO43924 150 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 COMPP49747 757 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 FOXL1Q12952 345 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 SP5Q6BEB4 398 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF841Q6ZN19 808 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 DOLPP1Q86YN1 238 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 AGBL5Q8NDL9 886 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 OR1L1Q8NH94 360 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 NAA38Q9BRA0 125 aaKnown RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 CSTL1Q9H114 145 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 C19orf25Q9UFG5 118 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
CLDN1-201ENST00000295522 TRAPPC2LH3BP13 241 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 SAP30O75446 220 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 SYNGR4O95473 234 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TIMP3P35625 211 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 MNX1P50219 401 aaPredicted RBP8.63□□□□□ -1.03
CLDN1-201ENST00000295522 DEFB133Q30KQ1 61 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 SSMEM1Q8WWF3 244 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TMEM147Q9BVK8 224 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 C17orf112F2Z3M2 114 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ZG16O60844 167 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ARL14EPLP0DKL9 152 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF32P17041 273 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 RAC1P63000 192 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 GABRA6Q16445 453 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 SLC22A18ASQ8N1D0 253 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 OR2D3Q8NGH3 330 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 NPCDR1Q9BY65 106 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 SVILO95425 2214 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ACTL6BO94805 426 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 IGKV1-5P01602 117 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF83P51522 516 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TMEM240Q5SV17 173 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 TMEM144Q7Z5S9 345 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 KCNS1Q96KK3 526 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 OR2W1Q9Y3N9 320 aa8.63□□□□□ -1.03
CLDN1-201ENST00000295522 ABCA7Q8IZY2 2146 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 IGKV1-6A0A0C4DH72 117 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 A0A1W2PS18 150 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CIDEAO60543 219 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 S1PR2O95136 353 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 COL8A2P25067 703 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 UQCRFS1P47985 274 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 ACSF3Q4G176 576 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 MKXQ8IYA7 352 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 NHLRC2Q8NBF2 726 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 MRGPRX1Q96LB2 322 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CLEC7AQ9BXN2 247 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 RNASE7Q9H1E1 156 aaKnown RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms