RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 BET1O15155 118 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 DENRO43583 198 aaKnown RBP10.83□□□□□ -0.68
TPM1-202ENST00000288398 RGS10O43665 173 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
TPM1-202ENST00000288398 GADD45AP24522 165 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
TPM1-202ENST00000288398 LGALS7P47929 136 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 FAM89BQ8N5H3 189 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 POC5Q8NA72 575 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 OR10J5Q8NHC4 309 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 FAM3DQ96BQ1 224 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 PHB2Q99623 299 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 PECRQ9BY49 303 aa10.83□□□□□ -0.68
TPM1-202ENST00000288398 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
TPM1-202ENST00000288398 IGKV1-16P04430 117 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 LYL1P12980 280 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 RPS25P62851 125 aaKnown RBP10.82□□□□□ -0.68
TPM1-202ENST00000288398 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 RTL8BQ17RB0 113 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 MOGAT2Q3SYC2 334 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 ZNF383Q8NA42 475 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 OR5T1Q8NG75 326 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 RAB3CQ96E17 227 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 RHOVQ96L33 236 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 TMEM68Q96MH6 324 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 GINS4Q9BRT9 223 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 OR2D2Q9H210 308 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 V9GY05 133 aa10.82□□□□□ -0.68
TPM1-202ENST00000288398 STAB2Q8WWQ8 2551 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 SORL1Q92673 2214 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 ANKRD34BA5PLL1 514 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 TRIM64CA6NLI5 447 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 PDCD5O14737 125 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 SHOXO15266 292 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 FABP7O15540 132 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 AADACP22760 399 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 TALDO1P37837 337 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 CLDN12P56749 244 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
TPM1-202ENST00000288398 MLLT11Q13015 90 aaPredicted RBP10.81□□□□□ -0.68
TPM1-202ENST00000288398 TPBGQ13641 420 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 C2orf76Q3KRA6 126 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 CENPOQ9BU64 300 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 ACOT13Q9NPJ3 140 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 TPSG1Q9NRR2 321 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 COA4Q9NYJ1 87 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 RAB22AQ9UL26 194 aa10.81□□□□□ -0.68
TPM1-202ENST00000288398 H0Y980 276 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 MPPED1O15442 326 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 RRASP10301 218 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 CD37P11049 281 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 HES5Q5TA89 166 aa10.8□□□□□ -0.68
TPM1-202ENST00000288398 A0A075B6Q4 140 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 A0A0B4J203 849 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 MYL9P24844 172 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 TMEM50BP56557 158 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 ARFRP1Q13795 201 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 IRF3Q14653 427 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 CASC10Q5T4H9 136 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 TMEM91Q6ZNR0 172 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 GTSCR1Q86UQ5 136 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 HAPLN4Q86UW8 402 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 ADTRPQ96IZ2 230 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 GFI1Q99684 422 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 MGLLQ99685 303 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 VCX3BQ9H321 246 aa10.79□□□□□ -0.68
TPM1-202ENST00000288398 IGKV1-6A0A0C4DH72 117 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 TMEM272A0A1B0GTI8 110 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 METTL21EPA6NDL7 271 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 FOXI3A8MTJ6 420 aaPredicted RBP10.78□□□□□ -0.68
TPM1-202ENST00000288398 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
TPM1-202ENST00000288398 ACTL6BO94805 426 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 IGLV1-51P01701 117 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 FCGR3AP08637 254 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 IGHV4-30-4P0DP06 118 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 AQP4P55087 323 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 LINC00205P59089 165 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 RPEL1Q2QD12 228 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 PLAC9Q5JTB6 97 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 BVESQ8NE79 360 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 OR9G4Q8NGQ1 327 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 ISOC1Q96CN7 298 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 USMG5Q96IX5 58 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 TUBA4BQ9H853 241 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 SDHAF2Q9NX18 166 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
TPM1-202ENST00000288398 BLOC1S6Q9UL45 172 aa10.78□□□□□ -0.68
TPM1-202ENST00000288398 PROP1O75360 226 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 DIRAS3O95661 229 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 GSTT2P0CG29 244 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 FABP5Q01469 135 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 TNXAQ16473 311 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms