RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TSNAXQ99598 290 aaKnown RBP19.8■□□□□ 0.76
PDF-201ENST00000288022 PARP11Q9NR21 331 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 NECAP2Q9NVZ3 263 aa19.8■□□□□ 0.76
PDF-201ENST00000288022 MRPS7Q9Y2R9 242 aaKnown RBP19.8■□□□□ 0.76
PDF-201ENST00000288022 FAM25AB3EWG3 89 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 FAM25CB3EWG5 89 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 FAM25GB3EWG6 89 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 HLA-DQB1P01920 261 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 PRSS3P35030 304 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 COMMD1Q8N668 190 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 ZNF645Q8N7E2 425 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 OR51J1Q9H342 316 aa19.79■□□□□ 0.76
PDF-201ENST00000288022 METTL1Q9UBP6 276 aaKnown RBP19.79■□□□□ 0.76
PDF-201ENST00000288022 PF4V1P10720 104 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 ELK1P19419 428 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 RPL5P46777 297 aaKnown RBP19.78■□□□□ 0.76
PDF-201ENST00000288022 TAGLNQ01995 201 aaKnown RBP19.78■□□□□ 0.76
PDF-201ENST00000288022 PSG5Q15238 335 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 RTL8BQ17RB0 113 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 TEX38Q6PEX7 206 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 BVESQ8NE79 360 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 SNAPC3Q92966 411 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 ADTRPQ96IZ2 230 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 PKD1L1Q8TDX9 2849 aa19.78■□□□□ 0.76
PDF-201ENST00000288022 TRRAPQ9Y4A5 3859 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 IGHV7-81A0A0B4J1V7 117 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 IGKV1D-13A0A0B4J2D9 117 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 ATP6V0E1O15342 81 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 SLC22A5O76082 557 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 IGF1P05019 195 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 OR5H8P0DN80 308 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 IGKV1-13P0DP09 117 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 FCGR2CP31995 323 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 DUTP33316 252 aaKnown RBP19.77■□□□□ 0.76
PDF-201ENST00000288022 SPCS2Q15005 226 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 OR5AP2Q8NGF4 316 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 RAB2BQ8WUD1 216 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 CLCC1Q96S66 551 aa19.77■□□□□ 0.76
PDF-201ENST00000288022 NOL3O60936 208 aaKnown RBP19.76■□□□□ 0.75
PDF-201ENST00000288022 TUSC2O75896 110 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 SPDEFO95238 335 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 RRASP10301 218 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 CDK10Q15131 360 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 SNX29P2Q8IUI4 249 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 ABHD5Q8WTS1 349 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 HARBI1Q96MB7 349 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 RBMX2Q9Y388 322 aaKnown RBP19.76■□□□□ 0.75
PDF-201ENST00000288022 WSB1Q9Y6I7 421 aa19.76■□□□□ 0.75
PDF-201ENST00000288022 MGAM2Q2M2H8 2515 aa19.75■□□□□ 0.75
PDF-201ENST00000288022 SLC25A17O43808 307 aa19.75■□□□□ 0.75
PDF-201ENST00000288022 AADACP22760 399 aa19.75■□□□□ 0.75
PDF-201ENST00000288022 TMBIM6P55061 237 aa19.75■□□□□ 0.75
PDF-201ENST00000288022 SECTM1Q8WVN6 248 aa19.75■□□□□ 0.75
PDF-201ENST00000288022 LINC00473A8K010 186 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 NUDT19A8MXV4 375 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 FCN1O00602 326 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 SHOXO15266 292 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 LGALS7P47929 136 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 RPL23AP62750 156 aaKnown RBP19.74■□□□□ 0.75
PDF-201ENST00000288022 CX3CL1P78423 397 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 CXorf66Q5JRM2 361 aaPredicted RBP19.74■□□□□ 0.75
PDF-201ENST00000288022 ZNF660Q6AZW8 331 aaPredicted RBP19.74■□□□□ 0.75
PDF-201ENST00000288022 KCTD9Q7L273 389 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 EHFQ9NZC4 300 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 SCOCQ9UIL1 159 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 ZNF580Q9UK33 172 aa19.74■□□□□ 0.75
PDF-201ENST00000288022 WNK1Q9H4A3 2382 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 TRAV41A0A0B4J266 112 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 G3V318 75 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 PPYP01298 95 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 PF4P02776 101 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 FXYD4P59646 89 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 FOXE3Q13461 319 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 DDB2Q92466 427 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 ZFP57Q9NU63 452 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 PRELID3BQ9Y3B1 194 aa19.73■□□□□ 0.75
PDF-201ENST00000288022 CRYZL1O95825 349 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 CA2P00918 260 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 PMP2P02689 132 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 RPLP1P05386 114 aaKnown RBP19.72■□□□□ 0.75
PDF-201ENST00000288022 NDPQ00604 133 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 CFHR3Q02985 330 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 ECSCRQ19T08 205 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 TMEM177Q53S58 311 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 LCNL1Q6ZST4 164 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 OR5H2Q8NGV7 314 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 BCL7BQ9BQE9 202 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 DCUN1D5Q9BTE7 237 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 SCPEP1Q9HB40 452 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 TPSG1Q9NRR2 321 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 ANAPC10Q9UM13 185 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 A3GALT2U3KPV4 340 aa19.72■□□□□ 0.75
PDF-201ENST00000288022 VWFP04275 2813 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 RGS5O15539 181 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 IGLV2-14P01704 120 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 IGHG4P01861 327 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 ELANEP08246 267 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 TAS2R46P59540 309 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 OR2B11Q5JQS5 317 aa19.71■□□□□ 0.75
PDF-201ENST00000288022 KLHL30-AS1Q8NEE0 82 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms