RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 IGHV5-51A0A0C4DH38 117 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 RPL36A-HNRNPH2H7BZ11 118 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 NPIPB4C9JG80 1138 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 CD8AP01732 235 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 MARVELD1Q9BSK0 173 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 ETHE1O95571 254 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 IGHV4-39P01824 125 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 C12orf73Q69YU5 71 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 IGKV3D-20A0A0C4DH25 116 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 SRIP30626 198 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 TMEM42Q69YG0 159 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 TCRBV16S1A1N1A0A5B0 115 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 FOXI3A8MTJ6 420 aaPredicted RBP11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 M0R381 172 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 RPS11P62280 158 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 CTSSP25774 331 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 ZNF107Q9UII5 783 aaPredicted RBP11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 TNFSF18Q9UNG2 199 aa11.48□□□□□ -0.57
SMARCA5-201ENST00000283131 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 LINC01587Q99440 93 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 SPTBN2O15020 2390 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 NDUFA2O43678 99 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 SYNGR3O43761 229 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 CEP250Q9BV73 2442 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 C1orf185Q5T7R7 199 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 CCL13Q99616 98 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 UBR2Q8IWV8 1755 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 A0A1B0GV90 55 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 F8WEM9 126 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 ZNF645Q8N7E2 425 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 TP53BP1Q12888 1972 aaPredicted RBP11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 CTSVO60911 334 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 Q5PR19 223 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 TRAF4Q9BUZ4 470 aaPredicted RBP11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
SMARCA5-201ENST00000283131 LDLRAD4O15165 306 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 HOXD4P09016 255 aaPredicted RBP11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 CRYBB2P43320 205 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 A0A1B0GTH9 108 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 RSPO2Q6UXX9 243 aaPredicted RBP11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 SMAD7O15105 426 aaKnown RBP11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 PDLIM4P50479 330 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 RIMKLAQ8IXN7 391 aa11.46□□□□□ -0.57
SMARCA5-201ENST00000283131 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 CHD3Q12873 2000 aaKnown RBP11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 KIDINS220Q9ULH0 1771 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 CTDSPLO15194 276 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 FXYD3Q14802 87 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 WDFY2Q96P53 400 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 TCRBV5S2A0A599 114 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 TMEM196Q5HYL7 178 aa11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 QTRT1Q9BXR0 403 aaKnown RBP11.46□□□□□ -0.58
SMARCA5-201ENST00000283131 NIT1Q86X76 327 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 SDHCQ99643 169 aaPredicted RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 TRGC2P03986 189 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 MDKP21741 143 aaPredicted RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 CD69Q07108 199 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 ADAD2Q8NCV1 583 aaKnown RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 KCNS1Q96KK3 526 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 TMEM74BQ9NUR3 256 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 SPTA1P02549 2419 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 HMGA1P17096 107 aaKnown RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 RND2P52198 227 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 ST6GAL2Q96JF0 529 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 ZNF142P52746 1687 aaPredicted RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 TMEM131LA2VDJ0 1609 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 MGST3O14880 152 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 FAM209BQ5JX69 171 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 GOLT1AQ6ZVE7 132 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 DERL1Q9BUN8 251 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 JPT2Q9H910 190 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 SDF2L1Q9HCN8 221 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 YAE1D1Q9NRH1 226 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 INSL4Q14641 139 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 SPSB4Q96A44 273 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 IFT172Q9UG01 1749 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 TRAV8-4A0A0B4J246 113 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 C8orf88P0DMB2 117 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 HIST1H4AP62805 103 aaKnown RBP11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 DDA1Q9BW61 102 aa11.45□□□□□ -0.58
SMARCA5-201ENST00000283131 CISD1Q9NZ45 108 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms