RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 RAB18Q9NP72 206 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 CTSZQ9UBR2 303 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ZANQ9Y493 2812 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 SPDEFO95238 335 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 UCP3P55916 312 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 SRSF7Q16629 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
GGPS1-201ENST00000282841 RPL39P5Q59GN2 51 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 Q5PR19 223 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 PRAMEF5Q5TYX0 476 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ZNF788Q6ZQV5 615 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
GGPS1-201ENST00000282841 TMUB2Q71RG4 321 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 MOB1BQ7L9L4 216 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ZNF695Q8IW36 515 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ZNF383Q8NA42 475 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ZNF665Q9H7R5 613 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 RPH3ALQ9UNE2 315 aa9.09□□□□□ -0.95
GGPS1-201ENST00000282841 ECI1P42126 302 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
GGPS1-201ENST00000282841 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 CCDC71LQ8N9Z2 235 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 FAM222BQ8WU58 562 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 TMEM222Q9H0R3 208 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 SLC25A10Q9UBX3 287 aaPredicted RBP9.08□□□□□ -0.96
GGPS1-201ENST00000282841 SPINT2O43291 252 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 C17orf58Q2M2W7 97 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 ALKAL2Q6UX46 152 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 C1orf122Q6ZSJ8 110 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 ZNF561Q8N587 486 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 OR1S1Q8NH92 325 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 THAP6Q8TBB0 222 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 Q8TCH9 128 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 C2orf50Q96LR7 162 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 CALYQ9NYX4 217 aa9.08□□□□□ -0.96
GGPS1-201ENST00000282841 A8MXK9 166 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 DVL1O14640 695 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 CD55P08174 381 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 HLA-GP17693 338 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 F2RP25116 425 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
GGPS1-201ENST00000282841 SELENOHQ8IZQ5 122 aaKnown RBP9.07□□□□□ -0.96
GGPS1-201ENST00000282841 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 SDSLQ96GA7 329 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 RNF222A6NCQ9 220 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 PROP1O75360 226 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
GGPS1-201ENST00000282841 IFNA21P01568 189 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 IGKV1-39P01597 117 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 IGKV1D-39P04432 117 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 C18orf12Q96KH6 178 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 TREM1Q9NP99 234 aa9.07□□□□□ -0.96
GGPS1-201ENST00000282841 TRAV38-1A0A0B4J264 116 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 A1L4Q6 167 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 LINC00473A8K010 186 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 MBPP02686 304 aaPredicted RBP9.06□□□□□ -0.96
GGPS1-201ENST00000282841 SERPINE2P07093 398 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 BMI1P35226 326 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 LOXL3P58215 753 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 NUTF2P61970 127 aaKnown RBP9.06□□□□□ -0.96
GGPS1-201ENST00000282841 RPL31P62899 125 aaKnown RBP9.06□□□□□ -0.96
GGPS1-201ENST00000282841 Q6ZRM9 215 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 FAM185AQ8N0U4 392 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 LGI3Q8N145 548 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 BVESQ8NE79 360 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 PPP1R35Q8TAP8 253 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 SEBOXQ9HB31 216 aaPredicted RBP9.06□□□□□ -0.96
GGPS1-201ENST00000282841 C17orf98A8MV24 154 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 KRASP01116 189 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
GGPS1-201ENST00000282841 S100A11P31949 105 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 EFNB3Q15768 340 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 MORN2Q502X0 79 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 TEX36Q5VZQ5 186 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 LPCAT3Q6P1A2 487 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 VKORC1L1Q8N0U8 176 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 DIRC2Q96SL1 478 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 AGMATQ9BSE5 352 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 TMEM204Q9BSN7 226 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 SIRT7Q9NRC8 400 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 A0A0B4J2A0 478 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 SOX15O60248 233 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 CRYBA1P05813 215 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 ADH4P08319 380 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 BRWD1-AS2P59051 145 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 ZNF585BQ52M93 769 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 CBLN2Q8IUK8 224 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 TCTEX1D2Q8WW35 142 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 IGFBPL1Q8WX77 278 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 C14orf79Q96F83 325 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 NMES1Q9C002 83 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 SHPKQ9UHJ6 478 aa9.06□□□□□ -0.96
GGPS1-201ENST00000282841 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms