RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 SLC35E4Q6ICL7 350 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ODF3L1Q8IXM7 274 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 Q8NA96 180 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 OR10Z1Q8NGY1 313 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 PPP1R35Q8TAP8 253 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 LINC01560Q8TB33 94 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SDSLQ96GA7 329 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SFXN3Q9BWM7 321 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 RBKSQ9H477 322 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 GCM1Q9NP62 436 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 RNF115Q9Y4L5 304 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 URGCP-MRPS24S4R325 110 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 CENPEQ02224 2701 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 TRBV6-6A0A0A6YYG2 114 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 DPRXA6NFQ7 191 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 MARCH11A6NNE9 402 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 PITX3O75364 302 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 IFNA10P01566 189 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 TNFSF4P23510 183 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SULT1A1P50225 295 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF134P52741 427 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 DVL1P1P54792 670 aaPredicted RBP5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 BAXQ07812 192 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 KRTCAP3Q53RY4 240 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 UQCC3Q6UW78 93 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 C14orf79Q96F83 325 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 OR4C12Q96R67 309 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ATP5SQ99766 215 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 GINS3Q9BRX5 216 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 HES4Q9HCC6 221 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 RNF7Q9UBF6 113 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ARHGAP32A7KAX9 2087 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 PKD1L2Q7Z442 2459 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 DCHS2Q6V1P9 2916 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 RNF212BA8MTL3 300 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 H7C2Y5 167 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF737O75373 536 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 MMP23AO75900 390 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 MYOD1P15172 320 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 GRNP28799 593 aaKnown RBP5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 TIMP3P35625 211 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SNCAP37840 140 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SLC38A11Q08AI6 406 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 MSMO1Q15800 293 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 R3HDM4Q96D70 268 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 POM121Q96HA1 1249 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 RAB40CQ96S21 281 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 ZNF665Q9H7R5 613 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 SAP30LQ9HAJ7 183 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 CALYQ9NYX4 217 aa5.03□□□□□ -1.6
TNFSF4-201ENST00000281834 MYO18BQ8IUG5 2567 aa5.03□□□□□ -1.61
TNFSF4-201ENST00000281834 TRAV3A0A0B4J244 114 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 MGST3O14880 152 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CCL3L1P16619 93 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 TNFRSF9Q07011 255 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 MZT1Q08AG7 82 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 PEA15Q15121 130 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 SRSF7Q16629 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 SOHLH1Q5JUK2 328 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF295-AS1Q8N0V1 137 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 OR5T1Q8NG75 326 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 DTD1Q8TEA8 209 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 IFT22Q9H7X7 185 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 RPRMQ9NS64 109 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 RPL35P42766 123 aaKnown RBP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 BRWD1-AS2P59051 145 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 RPS23P62266 143 aaKnown RBP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 RAB11AP62491 216 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 HBG1P69891 147 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 HBG2P69892 147 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF674Q2M3X9 581 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 AWAT1Q58HT5 328 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 HAPLN4Q86UW8 402 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CLRN3Q8NCR9 226 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 OR4A16Q8NH70 328 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 WFIKKN1Q96NZ8 548 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CLCC1Q96S66 551 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 PBDC1Q9BVG4 233 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 WSB1Q9Y6I7 421 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 NAV3Q8IVL0 2385 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 TRGV10A0A0A0MS01 117 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 K7N7A8 449 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CDK2AP1O14519 115 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 DFFBO76075 338 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 LY6HO94772 140 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 PLAUP00749 431 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 IFNA4P05014 189 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 OR9G9P0C7N8 305 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 GZMHP20718 246 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 COL8A2P25067 703 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 LMO1P25800 156 aa5.02□□□□□ -1.61
TNFSF4-201ENST00000281834 CEACAM8P31997 349 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms