RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 H0YIZ8 118 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 C1QBP02746 253 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 GIPP09681 153 aaPredicted RBP10.86□□□□□ -0.67
ACER3-201ENST00000278544 TRAPPC2P0DI81 140 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 TRAPPC2BP0DI82 140 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 MEF2CQ06413 473 aaPredicted RBP10.86□□□□□ -0.67
ACER3-201ENST00000278544 ITGB1BP2Q9UKP3 347 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 DBX1A6NMT0 343 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 IGHV2-5P01817 119 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 LIPFP07098 398 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 DUTP33316 252 aaKnown RBP10.86□□□□□ -0.67
ACER3-201ENST00000278544 RAP2BP61225 183 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 ODF3L1Q8IXM7 274 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 RBPMSQ93062 196 aaKnown RBP10.86□□□□□ -0.67
ACER3-201ENST00000278544 PIMREGQ9BSJ6 248 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 IAPPP10997 89 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 LMO4P61968 165 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 ZNF486Q96H40 463 aaPredicted RBP10.85□□□□□ -0.67
ACER3-201ENST00000278544 SOX21Q9Y651 276 aaPredicted RBP10.85□□□□□ -0.67
ACER3-201ENST00000278544 TRAV3A0A0B4J244 114 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 J3QR06 171 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 SSX2Q16385 188 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 ZNF383Q8NA42 475 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 OR1S1Q8NH92 325 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 LHX4Q969G2 390 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 GPR146Q96CH1 333 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 PSMG3-AS1Q96PY0 264 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 S1PR3Q99500 378 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 ARL6Q9H0F7 186 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 IGHV2-26A0A0B4J1V2 119 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 WRBO00258 174 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 RAB29O14966 203 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 SSSCA1O60232 199 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 OR2A4O95047 310 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 MPC2O95563 127 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 ARG1P05089 322 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 LGALSLQ3ZCW2 172 aaPredicted RBP10.85□□□□□ -0.67
ACER3-201ENST00000278544 LAMTOR1Q6IAA8 161 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 Q8N7P7 452 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 OR2A7Q96R45 310 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 RAB18Q9NP72 206 aa10.85□□□□□ -0.67
ACER3-201ENST00000278544 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
ACER3-201ENST00000278544 MXRA5Q9NR99 2828 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 MSGN1A6NI15 193 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CDS2O95674 445 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CXCL2P19875 107 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CATR1Q13166 79 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 LDLRAD2Q5SZI1 272 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 THOC7Q6I9Y2 204 aaKnown RBP10.84□□□□□ -0.67
ACER3-201ENST00000278544 THAP6Q8TBB0 222 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 TAS2R3Q9NYW6 316 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 H0Y980 276 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
ACER3-201ENST00000278544 UCP1P25874 307 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 PSMB6P28072 239 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 DLX6P56179 175 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 VMO1Q7Z5L0 202 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CORO2AQ92828 525 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 RITA1Q96K30 269 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 C2orf50Q96LR7 162 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 MBPP02686 304 aaPredicted RBP10.84□□□□□ -0.67
ACER3-201ENST00000278544 SLC25A48Q6ZT89 311 aaKnown RBP10.84□□□□□ -0.67
ACER3-201ENST00000278544 C10orf105Q8TEF2 133 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 CLCC1Q96S66 551 aa10.84□□□□□ -0.67
ACER3-201ENST00000278544 L7N2F9 121 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 CAV2P51636 162 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 ZNF439Q8NDP4 499 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 C18orf12Q96KH6 178 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 ZNF251Q9BRH9 671 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 MFFQ9GZY8 342 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 CT45A6P0DMU7 189 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 CT45A5P0DMU8 189 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 CT45A7P0DMV0 189 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 TMEM217Q8N7C4 229 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 HYLS1Q96M11 299 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 AKR1E2Q96JD6 320 aa10.83□□□□□ -0.68
ACER3-201ENST00000278544 PAX5Q02548 391 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 RUSC1-AS1Q66K80 236 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 C9orf62Q8N4C0 152 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 R3HDM4Q96D70 268 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 SLC35D1Q9NTN3 355 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 TRBV23-1A0A0A0MS06 115 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 HES1Q14469 280 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 TGIF2LXQ8IUE1 241 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 OR9G1Q8NH87 305 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 BSCL2Q96G97 398 aaPredicted RBP10.82□□□□□ -0.68
ACER3-201ENST00000278544 RNF126Q9BV68 326 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 CLEC7AQ9BXN2 247 aa10.82□□□□□ -0.68
ACER3-201ENST00000278544 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
ACER3-201ENST00000278544 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms