RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TRAM1Q15629 374 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 ANKRD13BQ86YJ7 626 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 ZNF383Q8NA42 475 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 POC5Q8NA72 575 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 NRG4Q8WWG1 115 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 PTX4Q96A99 478 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 RHOVQ96L33 236 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 GFI1Q99684 422 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 OR2D2Q9H210 308 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 PALMDQ9NP74 551 aa9.82□□□□□ -0.84
CD44-203ENST00000278386 IGKV1-6A0A0C4DH72 117 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 ANKRD34BA5PLL1 514 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 FOXI3A8MTJ6 420 aaPredicted RBP9.81□□□□□ -0.84
CD44-203ENST00000278386 ARPC1BO15143 372 aaKnown RBP9.81□□□□□ -0.84
CD44-203ENST00000278386 BET1O15155 118 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 CD3GP09693 182 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 ZP3P21754 424 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 TMEM50BP56557 158 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 DEFA5Q01523 94 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 HES5Q5TA89 166 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 TMEM91Q6ZNR0 172 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 SGPP2Q8IWX5 399 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 FAM89BQ8N5H3 189 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 FAM3DQ96BQ1 224 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 HARBI1Q96MB7 349 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 CCDC90BQ9GZT6 254 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 TPRKBQ9Y3C4 175 aa9.81□□□□□ -0.84
CD44-203ENST00000278386 LYSTQ99698 3801 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 ERICH4A6NGS2 130 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 TRDCB7Z8K6 153 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 H3BUA1 57 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 FABP7O15540 132 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 DENRO43583 198 aaKnown RBP9.8□□□□□ -0.84
CD44-203ENST00000278386 RGS10O43665 173 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 PSMA1P25786 263 aaKnown RBP9.8□□□□□ -0.84
CD44-203ENST00000278386 RANBP1P43487 201 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 SERPINB10P48595 397 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 AQP4P55087 323 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 IRF3Q14653 427 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 PLAC9Q5JTB6 97 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.8□□□□□ -0.84
CD44-203ENST00000278386 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 OR4A4PQ8NGN8 299 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 PHB2Q99623 299 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
CD44-203ENST00000278386 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 RBM7Q9Y580 266 aaKnown RBP9.8□□□□□ -0.84
CD44-203ENST00000278386 STARD9Q9P2P6 4700 aa9.8□□□□□ -0.84
CD44-203ENST00000278386 A0A075B6Q4 140 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 TMEM272A0A1B0GTI8 110 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 SHOXO15266 292 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 PROP1O75360 226 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 FCGR3AP08637 254 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 CD37P11049 281 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 LYL1P12980 280 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 MLLT11Q13015 90 aaPredicted RBP9.79□□□□□ -0.84
CD44-203ENST00000278386 TPBGQ13641 420 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 RTL8BQ17RB0 113 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 IGSF11Q5DX21 431 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 OR10J5Q8NHC4 309 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 CABLES2Q9BTV7 478 aa9.79□□□□□ -0.84
CD44-203ENST00000278386 LDLRAD4O15165 306 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 MPPED1O15442 326 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 IGLV1-51P01701 117 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 IGLV2-23P01705 113 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 APELAP0DMC3 54 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 GADD45AP24522 165 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 LGALS7P47929 136 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 FABP5Q01469 135 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 PJVKQ0ZLH3 352 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 PLA2G7Q13093 441 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 C2orf76Q3KRA6 126 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 MAFIPQ8WZ33 124 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 RAB3CQ96E17 227 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 GINS4Q9BRT9 223 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 SDHAF2Q9NX18 166 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 RAB22AQ9UL26 194 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 V9GY05 133 aa9.78□□□□□ -0.84
CD44-203ENST00000278386 MAP2K4P45985 399 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.85
CD44-203ENST00000278386 TNXAQ16473 311 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 MOGAT2Q3SYC2 334 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 ZFAND6Q6FIF0 208 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 BVESQ8NE79 360 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 OR9G4Q8NGQ1 327 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 ISOC1Q96CN7 298 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 C5orf30Q96GV9 206 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 MGLLQ99685 303 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 TINAGL1Q9GZM7 467 aaPredicted RBP9.77□□□□□ -0.85
CD44-203ENST00000278386 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
CD44-203ENST00000278386 TNCP24821 2201 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 PDCD5O14737 125 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 GSTT2P0CG29 244 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 GSTT2BP0CG30 244 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms