RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MBP02144 154 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 CHRNA7P36544 502 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 CCDC144NLQ6NUI1 221 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 TRBV6-7A0A0A0MS04 114 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 UHRF2Q96PU4 802 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 PLAUP00749 431 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 EGR1P18146 543 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 HTR1DP28221 377 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 SRP14P37108 136 aaKnown RBP12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 RAB5CP51148 216 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 MS4A7Q9GZW8 240 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
PDLIM2-201ENST00000265810 NCOA6Q14686 2063 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 E7EQL1 145 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 HMGB3O15347 200 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 OR7C2O60412 319 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 MC5RP33032 325 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 NHLH2Q02577 135 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 C5orf24Q7Z6I8 188 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 VKORC1L1Q8N0U8 176 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM230Q96A57 120 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 COL4A2P08572 1712 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 SLC25A4P12235 298 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 LCN2P80188 198 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 RSRP1Q9BUV0 290 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 CLEC7AQ9BXN2 247 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 CXCL2P19875 107 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 S100A7P31151 101 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 C2orf68Q2NKX9 166 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
PDLIM2-201ENST00000265810 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 RBP4P02753 201 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SULT1A1P50225 295 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SSX2Q16385 188 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 IL34Q6ZMJ4 242 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SVBPQ8N300 66 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 OR51B2Q9Y5P1 312 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 EML6Q6ZMW3 1958 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 THBDP07204 575 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 MPZP25189 248 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 SNAPINO95295 136 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 IGLV1-44P01699 117 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM147Q9BVK8 224 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
PDLIM2-201ENST00000265810 ACAA1P09110 424 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM30BQ3MIR4 351 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 Q6ZR03 302 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 FAM168AQ92567 244 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 LEUTXA8MZ59 168 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 ASCL4Q6XD76 172 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 SIGLEC5O15389 551 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 FOXH1O75593 365 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 DEDDO75618 318 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 LY6HO94772 140 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 NPY1RP25929 384 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 ATP6V1FQ16864 119 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM252Q8N6L7 170 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 CHODLQ9H9P2 273 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 C19orf12Q9NSK7 152 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 TRBV23-1A0A0A0MS06 115 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 SLC25A17O43808 307 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 OR2A4O95047 310 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms