RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 GPR31O00270 319 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
SSBP1-201ENST00000265304 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-201ENST00000265304 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
SSBP1-201ENST00000265304 PAX6P26367 422 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 BTCP35070 178 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 REG1BP48304 166 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 THBS3P49746 956 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 BRWD1-AS2P59051 145 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 IFITM3Q01628 133 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 FAAP20Q6NZ36 180 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 CCBE1Q6UXH8 406 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-201ENST00000265304 C16orf82Q7Z2V1 217 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 CADM3Q8N126 398 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 SECTM1Q8WVN6 248 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 VPREB3Q9UKI3 123 aa11.43□□□□□ -0.58
SSBP1-201ENST00000265304 RBM7Q9Y580 266 aaKnown RBP11.43□□□□□ -0.58
SSBP1-201ENST00000265304 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 H3BUX3 64 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 J3QRK9 145 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 M0R1X1 148 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 TCF21O43680 179 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 PGLYRP1O75594 196 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 IFNA2P01563 188 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 FAM106CPP0CH98 169 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 RRASP10301 218 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 RAB13P51153 203 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 FXYD4P59646 89 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 BAMBIQ13145 260 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 ASAH1Q13510 395 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 ZNF57Q68EA5 555 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 IDO2Q6ZQW0 420 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 OR8H1Q8NGG4 311 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 RTBDNQ9BSG5 229 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-201ENST00000265304 PLSCR3Q9NRY6 295 aa11.42□□□□□ -0.58
SSBP1-201ENST00000265304 MOSP00540 346 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 SLC6A1P30531 599 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 LINC00205P59089 165 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 UBA52P62987 128 aaKnown RBP11.41□□□□□ -0.58
SSBP1-201ENST00000265304 FBLN7Q53RD9 439 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 TMEM177Q53S58 311 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 DHRS7BQ6IAN0 325 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-201ENST00000265304 C16orf87Q6PH81 154 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 KCTD9Q7L273 389 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 PDPNQ86YL7 162 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 CMTM1Q8IZ96 169 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 NPBQ8NG41 125 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 OR2T10Q8NGZ9 312 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 RBM14Q96PK6 669 aaKnown RBP11.41□□□□□ -0.58
SSBP1-201ENST00000265304 SCGB3A2Q96PL1 93 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 CHIAQ9BZP6 476 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 C5orf66Q9H5L9 145 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 ABCB10Q9NRK6 738 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 TBC1D24Q9ULP9 559 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
SSBP1-201ENST00000265304 CENPXA8MT69 81 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 LYRM1O43325 122 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 OR2F2O95006 317 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
SSBP1-201ENST00000265304 DRAXINQ8NBI3 349 aaPredicted RBP11.4□□□□□ -0.58
SSBP1-201ENST00000265304 MARCH1Q8TCQ1 289 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 TSC22D3Q99576 134 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 PALMDQ9NP74 551 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 SLC2A9Q9NRM0 540 aa11.4□□□□□ -0.58
SSBP1-201ENST00000265304 BTBD17A6NE02 478 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 FGF16O43320 207 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 B3GALNT1O75752 331 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 NDUFB6O95139 128 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 NDUFA3O95167 84 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 IGKV1D-33P01593 117 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 IGKV1-33P01594 117 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 AMY1AP04745 511 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 F2RP25116 425 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 KIR2DS2P43631 304 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 LGALS7P47929 136 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 INPP1P49441 399 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 DHODHQ02127 395 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 RBMS2Q15434 407 aaKnown RBP11.39□□□□□ -0.59
SSBP1-201ENST00000265304 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 SCGB2B2Q4G0G5 96 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 GLDNQ6ZMI3 551 aaPredicted RBP11.39□□□□□ -0.59
SSBP1-201ENST00000265304 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 OR4C13Q8NGP0 309 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 CD300LFQ8TDQ1 290 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 RAB18Q9NP72 206 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 PRELID3BQ9Y3B1 194 aa11.39□□□□□ -0.59
SSBP1-201ENST00000265304 IGHV3-72A0A0B4J1Y9 119 aa11.38□□□□□ -0.59
SSBP1-201ENST00000265304 RNF212BA8MTL3 300 aa11.38□□□□□ -0.59
SSBP1-201ENST00000265304 M0QZK8 103 aa11.38□□□□□ -0.59
SSBP1-201ENST00000265304 MPPED1O15442 326 aa11.38□□□□□ -0.59
SSBP1-201ENST00000265304 CHST1O43916 411 aa11.38□□□□□ -0.59
SSBP1-201ENST00000265304 GPR137BO60478 399 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms