RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 RAB35Q15286 201 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 MIC13Q5XKP0 118 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 MMD2Q8IY49 270 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 SIGLEC12Q96PQ1 595 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 PAX9P55771 341 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 CLDN15P56746 228 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 LCN2P80188 198 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 GCNT2Q8N0V5 402 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.87□□□□□ -0.19
GPC1-201ENST00000264039 GNG12Q9UBI6 72 aa13.87□□□□□ -0.19
GPC1-201ENST00000264039 FAM166BA8MTA8 275 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 NUDT3O95989 172 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 NMSQ5H8A3 153 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 TRAT1Q6PIZ9 186 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 LINC01551Q86U37 167 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 TPRX1Q8N7U7 411 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 MBD3L1Q8WWY6 194 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 DEPPQ9NTK1 212 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 CD207Q9UJ71 328 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 LINC01565O15544 149 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 RPL24P83731 157 aaKnown RBP13.86□□□□□ -0.19
GPC1-201ENST00000264039 OCC1Q8TAD7 63 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 LOXL4Q96JB6 756 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 HS3ST3A1Q9Y663 406 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 CELA2AP08217 269 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 TNFSF4P23510 183 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 PCBD1P61457 104 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 RPL31P62899 125 aaKnown RBP13.86□□□□□ -0.19
GPC1-201ENST00000264039 DTX1Q86Y01 620 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 ZNF114Q8NC26 417 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 ZNF501Q96CX3 271 aaPredicted RBP13.86□□□□□ -0.19
GPC1-201ENST00000264039 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 GAL3ST2Q9H3Q3 398 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 ANAPC10Q9UM13 185 aa13.86□□□□□ -0.19
GPC1-201ENST00000264039 USF1P22415 310 aaPredicted RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 SGK494Q96LW2 274 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 PSMG3Q9BT73 122 aaPredicted RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 TPPP3Q9BW30 176 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 PDE6DO43924 150 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 PSG4Q00888 419 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 KMT5CQ86Y97 462 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 SPACA9Q96E40 222 aaPredicted RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 NAA38Q9BRA0 125 aaKnown RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 FBXL7Q9UJT9 491 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 MRPS18CQ9Y3D5 142 aaKnown RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 INTS1Q8N201 2190 aaKnown RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 K7ERU9 68 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 ZFP36L1Q07352 338 aaKnown RBP13.85□□□□□ -0.19
GPC1-201ENST00000264039 ASPHD1Q5U4P2 390 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 GPR35Q9HC97 309 aa13.85□□□□□ -0.19
GPC1-201ENST00000264039 OR10J4P0C629 311 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 ERVK-16P61578 105 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 GNB1P62873 340 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 OR2T6Q8NHC8 308 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 PMCHL2Q9BQD1 86 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 PNRC2Q9NPJ4 139 aaKnown RBP13.84□□□□□ -0.19
GPC1-201ENST00000264039 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 CADP27708 2225 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 NCOR1O75376 2440 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 ODAMA1E959 279 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 MFAP2P55001 183 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 PXMP4Q9Y6I8 212 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 TRAV1-1A0A0B4J248 108 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 M0R1X1 148 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
GPC1-201ENST00000264039 KRTCAP3Q53RY4 240 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 PQLC2Q6ZP29 291 aa13.84□□□□□ -0.19
GPC1-201ENST00000264039 VAMP5O95183 116 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 P04436 131 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 GDF1P27539 372 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 SUMO3P55854 103 aaPredicted RBP13.83□□□□□ -0.2
GPC1-201ENST00000264039 PSG5Q15238 335 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 LHX2P50458 406 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 UBE2V1Q13404 147 aa13.83□□□□□ -0.2
GPC1-201ENST00000264039 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.2
GPC1-201ENST00000264039 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 IL6RP08887 468 aaPredicted RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 GAGE1Q13065 139 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 KIR2DL5AQ8N109 375 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 CORO2AQ92828 525 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 RASL10BQ96S79 203 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 MCRIP2Q9BUT9 160 aaKnown RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 NPCDR1Q9BY65 106 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 NUP210Q8TEM1 1887 aaPredicted RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 FCGR3BO75015 233 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 PSG1P11464 419 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 GPR6P46095 362 aaPredicted RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
GPC1-201ENST00000264039 OR8B8Q15620 311 aa13.82□□□□□ -0.2
GPC1-201ENST00000264039 ZNF841Q6ZN19 808 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms