RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF137PP52743 207 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 KRTAP10-9P60411 292 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 PAX2Q02962 417 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 FAM219AQ8IW50 185 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 PRELID3BQ9Y3B1 194 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 SNAPC5O75971 98 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 AKR1C2P52895 323 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 DLX1P56177 255 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 FAM71F2Q6NXP2 309 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 PRSS54Q6PEW0 395 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 ZNF546Q86UE3 836 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 KIR3DL3Q8N743 410 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 ZNF383Q8NA42 475 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 OR10X1Q8NGY0 326 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 TNFSF18Q9UNG2 199 aa18.66■□□□□ 0.58
SMARCB1-201ENST00000263121 FBN2P35556 2912 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 A0A1B0GU03 582 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 ENSAO43768 121 aaKnown RBP18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 FCGR3BO75015 233 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 IGLV1-47P01700 117 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 MBPP02686 304 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 P0C879 139 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 PET100P0DJ07 73 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 ARF6P62330 175 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 THOC7Q6I9Y2 204 aaKnown RBP18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 ST6GALNAC6Q969X2 333 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 CLEC7AQ9BXN2 247 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 USP9YO00507 2555 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 CRYBG3Q68DQ2 2970 aa18.65■□□□□ 0.58
SMARCB1-201ENST00000263121 CT45A6P0DMU7 189 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 CT45A5P0DMU8 189 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 CT45A7P0DMV0 189 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 DSCR9P59020 149 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 S100A10P60903 97 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 C1orf122Q6ZSJ8 110 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 RNASE11Q8TAA1 199 aaKnown RBP18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 TMEM186Q96B77 213 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 RRNAD1Q96FB5 475 aaKnown RBP18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 PLEKHA2Q9HB19 425 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 OR5AC2Q9NZP5 309 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 MMP24Q9Y5R2 645 aa18.64■□□□□ 0.57
SMARCB1-201ENST00000263121 IGHV4-30-2A0A087WSY4 118 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 TOR1AO14656 332 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 PITX3O75364 302 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 ATG12O94817 140 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 HPRT1P00492 218 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 LCN2P80188 198 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 Q6ZRM9 215 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 BEND2Q8NDZ0 799 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 MARVELD3Q96A59 401 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 ZFP57Q9NU63 452 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 IGHV4-61A0A0C4DH41 118 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 IGHV2-70DA0A0C4DH43 119 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 K7EPK0 472 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 DEDDO75618 318 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 SCGB1D2O95969 90 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 EPHA1P21709 976 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 G6PCP35575 357 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 PRRX1P54821 245 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 IZUMO4Q1ZYL8 232 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 HLA-DRB5Q30154 266 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 FAM71E2Q8N5Q1 922 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 OR1S1Q8NH92 325 aa18.63■□□□□ 0.57
SMARCB1-201ENST00000263121 L7N2F9 121 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 FOXH1O75593 365 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 KRASP01116 189 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 PRTN3P24158 256 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 PRB3Q04118 309 aaPredicted RBP18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 SMCO1Q147U7 214 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 OR4S2Q8NH73 311 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 DCUN1D4Q92564 292 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 MRPL20Q9BYC9 149 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 MFFQ9GZY8 342 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 CACNG5Q9UF02 275 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 POLR3KQ9Y2Y1 108 aaPredicted RBP18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 LSM5Q9Y4Y9 91 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 KPTNQ9Y664 436 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 POMT1Q9Y6A1 747 aa18.62■□□□□ 0.57
SMARCB1-201ENST00000263121 RNF222A6NCQ9 220 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 ST8SIA3O43173 380 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 COX7A1P24310 79 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 IL3RAP26951 378 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 NKX2-1P43699 371 aaPredicted RBP18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 FOXRED2Q8IWF2 684 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 OR13D1Q8NGV5 346 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 UNKLQ9H9P5 680 aaKnown RBP18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 ARHGAP32A7KAX9 2087 aa18.61■□□□□ 0.57
SMARCB1-201ENST00000263121 IFITM2Q01629 132 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 ID3Q02535 119 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 DIAPH2-AS1Q14236 149 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 ZNF345Q14585 488 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 CXorf66Q5JRM2 361 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 PNKDQ8N490 385 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 R3HDM4Q96D70 268 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 SIRT7Q9NRC8 400 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 MMP26Q9NRE1 261 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 COA4Q9NYJ1 87 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 MARCH11A6NNE9 402 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 FAM157AC9JC47 383 aa18.6■□□□□ 0.57
SMARCB1-201ENST00000263121 RLN2P04090 185 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms