RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 LIN7CQ9NUP9 197 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 THSD7BQ9C0I4 1608 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 TNFSF13O75888 250 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 UMODP07911 640 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 SRP14P37108 136 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 ZNF738Q8NE65 137 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 SSBP3Q9BWW4 388 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 C12orf49Q9H741 205 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 PPP1R14DQ9NXH3 145 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 NGFP01138 241 aa13.52□□□□□ -0.24
PRPF40B-201ENST00000261897 TFF1P04155 84 aa13.52□□□□□ -0.24
PRPF40B-201ENST00000261897 CCL1P22362 96 aa13.52□□□□□ -0.24
PRPF40B-201ENST00000261897 OR5P3Q8WZ94 311 aa13.52□□□□□ -0.24
PRPF40B-201ENST00000261897 FREM2Q5SZK8 3169 aa13.52□□□□□ -0.24
PRPF40B-201ENST00000261897 IGHV1OR21-1A0A087WYE8 117 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 CTXN2P0C2S0 81 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 SGK494Q96LW2 274 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 CACNA1BQ00975 2339 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 TMEM250H0YL14 139 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 RAMP3O60896 148 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 GDF1P27539 372 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 LINC01551Q86U37 167 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 HAPLN4Q86UW8 402 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 CNOT1A5YKK6 2376 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-201ENST00000261897 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 IGFBP4P22692 258 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 GNB1P62873 340 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 MRPS11P82912 194 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 HOXA4Q00056 320 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 PRAMEF5Q5TYX0 476 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 PRAMEF6Q5VXH4 476 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 AP1S3Q96PC3 154 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 IGKV1-6A0A0C4DH72 117 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 LRP5LA4QPB2 252 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 IFI6P09912 130 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 ABHD14BQ96IU4 210 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 PRB4P10163 310 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 EN2P19622 333 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 SUMO3P55854 103 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 SOX8P57073 446 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 OCC1Q8TAD7 63 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 MBD3L1Q8WWY6 194 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
PRPF40B-201ENST00000261897 FAM166BA8MTA8 275 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 LHX2P50458 406 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 OR4A47Q6IF82 309 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 Q6ZPA2 131 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 ARL6IP6Q8N6S5 226 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 SLC24A4Q8NFF2 622 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 ZC2HC1AQ96GY0 325 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 TP73-AS1Q9UF72 201 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 TNCP24821 2201 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 OR10J4P0C629 311 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 LINC00614P0C842 121 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 CLDN15P56746 228 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 OR1L1Q8NH94 360 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 MCRIP2Q9BUT9 160 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 RNF115Q9Y4L5 304 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 TOX3O15405 576 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 CCL25O15444 150 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 RHBDL1O75783 438 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 KRTCAP3Q53RY4 240 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 STUMQ69YW2 141 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 TCTEX1D1Q8N7M0 179 aa13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 ZNF331Q9NQX6 463 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-201ENST00000261897 P04436 131 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 GLB1P16278 677 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 VEGFBP49765 207 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 RPL31P62899 125 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 ABLIM2Q6H8Q1 611 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 CRIP3Q6Q6R5 217 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 OBP2AQ9NY56 170 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 S1PR2O95136 353 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 ZNF703Q9H7S9 590 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 RIPPLY3P57055 190 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 PCBD1P61457 104 aa13.49□□□□□ -0.25
PRPF40B-201ENST00000261897 PAFAH1B2P68402 229 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms