RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TCL1AP56279 114 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 UTF1Q5T230 341 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 HES3Q5TGS1 186 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 FOXL2NBQ6ZUU3 175 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 WDR86Q86TI4 376 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 PRSS33Q8NF86 280 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
SNX1-201ENST00000261889 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 RBFOX2O43251 390 aaKnown RBP eCLIP10.93□□□□□ -0.66
SNX1-201ENST00000261889 PSPNO60542 156 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 NXPH2O95156 264 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 MYOD1P15172 320 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 SLC10A1Q14973 349 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
SNX1-201ENST00000261889 MRGPRGQ86SM5 289 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 HBG1P69891 147 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 HBG2P69892 147 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 CEACAM21Q3KPI0 293 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 KMT5CQ86Y97 462 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 ATOH7Q8N100 152 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 TBX15Q96SF7 602 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 OR2J1Q9GZK6 312 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 TRAPPC1Q9Y5R8 145 aa10.93□□□□□ -0.66
SNX1-201ENST00000261889 ODAMA1E959 279 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 ACTL6BO94805 426 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 CLDN14O95500 239 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 SERPINA7P05543 415 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 FOLR3P41439 243 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 GABRA2P47869 451 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 RND2P52198 227 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 C10orf35Q96D05 121 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 RAB40CQ96S21 281 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 DEFB127Q9H1M4 99 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 SRD5A3Q9H8P0 318 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 TANC2Q9HCD6 1990 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 KBTBD11O94819 623 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 NPSP0C0P6 89 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 OR5I1Q13606 314 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 ATP1A1-AS1Q5TC04 95 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 POLR3KQ9Y2Y1 108 aaPredicted RBP10.92□□□□□ -0.66
SNX1-201ENST00000261889 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
SNX1-201ENST00000261889 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 ANKRD30BLA7E2S9 258 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 SLC25A6P12236 298 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 S100GP29377 79 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 OR5A2Q8NGI9 324 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 SAP25Q8TEE9 199 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 RNF114Q9Y508 228 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 LHFPL4Q7Z7J7 247 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 NDUFAF3Q9BU61 184 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 FKBP11Q9NYL4 201 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 AQP7O14520 342 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 ZNF883P0CG24 379 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 GNB1P62873 340 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 TNFRSF9Q07011 255 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 SPATA31B1PQ5VZV4 182 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 MS4A10Q96PG2 267 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 LRFN3Q9BTN0 628 aa10.91□□□□□ -0.66
SNX1-201ENST00000261889 KIAA1549Q9HCM3 1950 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 LYZL6O75951 148 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 PCBD1P61457 104 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 PRAMEF6Q5VXH4 476 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 NHLRC2Q8NBF2 726 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 MRPL37Q9BZE1 423 aaKnown RBP10.9□□□□□ -0.66
SNX1-201ENST00000261889 PSG11Q9UQ72 335 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 YLPM1P49750 1951 aaKnown RBP10.9□□□□□ -0.66
SNX1-201ENST00000261889 SPTA1P02549 2419 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 AGFG2O95081 481 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 HRASP01112 189 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 FOSL1P15407 271 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 ADMP35318 185 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 CYB561P49447 251 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 MIC13Q5XKP0 118 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 DPPA3Q6W0C5 159 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 Q6ZR03 302 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 TIPARPQ7Z3E1 657 aaKnown RBP10.9□□□□□ -0.66
SNX1-201ENST00000261889 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 HCFC1P51610 2035 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 PCNX2A6NKB5 2137 aa10.9□□□□□ -0.66
SNX1-201ENST00000261889 B4E171 279 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 COX5BP10606 129 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 SRD5A2P31213 254 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 TSPAN7P41732 249 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 SSTP61278 116 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 FOXO1Q12778 655 aa10.9□□□□□ -0.67
SNX1-201ENST00000261889 PNRC1Q12796 327 aaPredicted RBP10.9□□□□□ -0.67
SNX1-201ENST00000261889 FXYD3Q14802 87 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms