RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 VENTXO95231 258 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 IGHV3-7P01780 117 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 IGHV3-43DP0DP04 118 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 ANXA3P12429 323 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 SPNP16150 400 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 PAX6P26367 422 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 PRRX1P54821 245 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 DYNAPQ8N1N2 210 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
PFDN1-201ENST00000261813 PIPOXQ9P0Z9 390 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 ZNF221Q9UK13 617 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 PSG11Q9UQ72 335 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 VSIG4Q9Y279 399 aa9.36□□□□□ -0.91
PFDN1-201ENST00000261813 TBL2Q9Y4P3 447 aaKnown RBP9.36□□□□□ -0.91
PFDN1-201ENST00000261813 TOR1AO14656 332 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 FBP1P09467 338 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 OR8U9P0C7N5 309 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 PPP1CCP36873 323 aaKnown RBP9.35□□□□□ -0.91
PFDN1-201ENST00000261813 GNG10P50151 68 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 LGALS4P56470 323 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 RND3P61587 244 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 GNMTQ14749 295 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 C4orf46Q504U0 113 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 Q6YL49 198 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 GLDNQ6ZMI3 551 aaPredicted RBP9.35□□□□□ -0.91
PFDN1-201ENST00000261813 KCTD9Q7L273 389 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 LDLRAD3Q86YD5 345 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 LINC00311Q8N616 119 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 BEND2Q8NDZ0 799 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 BVESQ8NE79 360 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 OR8U1Q8NH10 309 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 OR9G1Q8NH87 305 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 SECTM1Q8WVN6 248 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 MRGPRFQ96AM1 343 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 ABHD14AQ9BUJ0 271 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 FAM96BQ9Y3D0 163 aa9.35□□□□□ -0.91
PFDN1-201ENST00000261813 A0A0A6YYJ9 748 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 TEX13DA0A0J9YY54 714 aaPredicted RBP9.34□□□□□ -0.91
PFDN1-201ENST00000261813 A0A1W2PPE3 182 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 DNAJC9-AS1A6NH13 148 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 J3QR06 171 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 RAB29O14966 203 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 SLC31A2O15432 143 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 HOXA3O43365 443 aaPredicted RBP9.34□□□□□ -0.91
PFDN1-201ENST00000261813 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
PFDN1-201ENST00000261813 IGLV1-40P01703 118 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 OR4E1P0C645 316 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 AKR1C4P17516 323 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 IL3RAP26951 378 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 GNRHRP30968 328 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 PIGPP57054 158 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 DHODHQ02127 395 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 BAMBIQ13145 260 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 RBMS3Q6XE24 437 aaKnown RBP9.34□□□□□ -0.91
PFDN1-201ENST00000261813 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 ZNF439Q8NDP4 499 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 DUX5Q96PT3 197 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 RTBDNQ9BSG5 229 aaPredicted RBP9.34□□□□□ -0.91
PFDN1-201ENST00000261813 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 MINOS1-NBL1R4GNA1 71 aa9.34□□□□□ -0.91
PFDN1-201ENST00000261813 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 IGHV4-59P01825 116 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 ANXA7P20073 488 aaKnown RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 HTR1DP28221 377 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 GPR12P47775 334 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 RAB25P57735 213 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 UBA52P62987 128 aaKnown RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 SRPXP78539 464 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 CATR1Q13166 79 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 SLC9A3R2Q15599 337 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 FAM71F2Q6NXP2 309 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 SLC25A48Q6ZT89 311 aaKnown RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 RTN4IP1Q8WWV3 396 aaPredicted RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 MALSU1Q96EH3 234 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 JMJD8Q96S16 334 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 S1PR3Q99500 378 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 AGMATQ9BSE5 352 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 SLC2A9Q9NRM0 540 aa9.33□□□□□ -0.92
PFDN1-201ENST00000261813 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
PFDN1-201ENST00000261813 A0A0B4J2A0 478 aa9.32□□□□□ -0.92
PFDN1-201ENST00000261813 IGKV1D-13A0A0B4J2D9 117 aa9.32□□□□□ -0.92
PFDN1-201ENST00000261813 CRYM-AS1A6NIL9 109 aa9.32□□□□□ -0.92
PFDN1-201ENST00000261813 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
PFDN1-201ENST00000261813 HSD17B6O14756 317 aa9.32□□□□□ -0.92
PFDN1-201ENST00000261813 MPPED1O15442 326 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms