RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TRAV8-7A0A075B6U6 113 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 NPFFO15130 113 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 ADRB1P08588 477 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 IGSF11Q5DX21 431 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 SPRR3Q9UBC9 169 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
PDGFRB-201ENST00000261799 IGLV3-12A0A075B6K2 115 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 LINC00869P0C866 280 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 HTN3P15516 51 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 GALNT14Q96FL9 552 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 REG1AP05451 166 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 SCTP09683 121 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 MYOD1P15172 320 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 KLHDC1Q8N7A1 406 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF236Q9UL36 1845 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 TRBV5-3A0A0A0MS03 114 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 WISP3O95389 354 aaPredicted RBP11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 UQCRFS1P47985 274 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 DLX6P56179 175 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 SAMD13Q5VXD3 122 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 STHQ8IWL8 128 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 NRIP2Q9BQI9 281 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 FAM206AQ9NX38 181 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 NPIPB13A6NJU9 1138 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 NPIPB4C9JG80 1138 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 ADAP1O75689 374 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 CX3CL1P78423 397 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 EWSR1Q01844 656 aaKnown RBP eCLIP11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 PDZD11Q5EBL8 140 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 FBXL7Q9UJT9 491 aa11.57□□□□□ -0.56
PDGFRB-201ENST00000261799 LOC390937A0A1W2PQ73 354 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 B4DSR2 109 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF146Q15072 292 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 WDFY1Q8IWB7 410 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 FAM216AQ8WUB2 273 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 LIMS1P48059 325 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 DLX1P56177 255 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 CTF1Q16619 201 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 COX19Q49B96 90 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 LYZL2Q7Z4W2 148 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 MELTFP08582 738 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 RPS20P60866 119 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNRF1Q8ND25 227 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 BRCA1P38398 1863 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 RAG2P55895 527 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 CMC4P56277 68 aaPredicted RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 FUT5Q11128 374 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 RTN4RQ9BZR6 473 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 RBKSQ9H477 322 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 RCC2Q9P258 522 aaKnown RBP11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
PDGFRB-201ENST00000261799 K7ENP7 123 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 RHOVQ96L33 236 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 IQCF6A8MYZ5 107 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 UQCC3Q6UW78 93 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 AQP3Q92482 292 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 LPAR5Q9H1C0 372 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 C1QTNF9BB2RNN3 333 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 MPDU1O75352 247 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 C1QTNF9P0C862 333 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 ERVS71-1P61550 626 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 POC1AQ8NBT0 407 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 TMEM204Q9BSN7 226 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 NUP205Q92621 2012 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 AKIP1Q9NQ31 210 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 PITX3O75364 302 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 CA7P43166 264 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF385CQ66K41 422 aaPredicted RBP11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 FAM216BQ8N7L0 139 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 SEMA5BQ9P283 1151 aa11.55□□□□□ -0.56
PDGFRB-201ENST00000261799 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 ISLRO14498 428 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 MOGAT2Q3SYC2 334 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 LTBP1Q14766 1721 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 C17orf51A8MQB3 221 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 CSN3P07498 182 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 MMP9P14780 707 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 ABLIM2Q6H8Q1 611 aa11.54□□□□□ -0.56
PDGFRB-201ENST00000261799 ZNF841Q6ZN19 808 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms