RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RAB29O14966 203 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 MT-ND6P03923 174 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 CEACAM1P13688 526 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 HTR1DP28221 377 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM251Q8N6I4 163 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 ST6GALNAC3Q8NDV1 305 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 PRSS3P2Q8NHM4 247 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 WDYHV1Q96HA8 205 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 MRPL13Q9BYD1 178 aaKnown RBP13.87□□□□□ -0.19
SREBF1-201ENST00000261646 DLL3Q9NYJ7 618 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 K7EQM0 130 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 VENTXO95231 258 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 HAND1O96004 215 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 CYC1P08574 325 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 LYL1P12980 280 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 OR51G1Q8NGK1 321 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 IGKV1D-13A0A0B4J2D9 117 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 SLC17A3O00476 420 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 IGKV1-13P0DP09 117 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 QRFPP83859 136 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 TEPPQ6URK8 271 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 TCF23Q7RTU1 214 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 ZNF525Q8N782 197 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
SREBF1-201ENST00000261646 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 ID3Q02535 119 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 MMD2Q8IY49 270 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 OR52L2PQ8NGH6 319 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 IL19Q9UHD0 177 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 OR4A8P0C604 315 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 ZNF837Q96EG3 531 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-201ENST00000261646 MRPL37Q9BZE1 423 aaKnown RBP13.86□□□□□ -0.19
SREBF1-201ENST00000261646 ANAPC1Q9H1A4 1944 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 HES4Q9HCC6 221 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 GZMBP10144 247 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 NPY1RP25929 384 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM56Q96MV1 263 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 MIEN1Q9BRT3 115 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM56-RWDD3S4R434 201 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
SREBF1-201ENST00000261646 C1QTNF9BB2RNN3 333 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 ZBTB34Q8NCN2 500 aa13.86□□□□□ -0.19
SREBF1-201ENST00000261646 LSM10Q969L4 123 aaKnown RBP13.86□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A10PA6NDY2 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A18PA6NE21 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A16PA6NEW6 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 OOEPA6NGQ2 149 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A20PA6NIJ5 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A8PA6NJQ4 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A7PA6NKC0 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A22PA8MWA6 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A12PA8MX19 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A5PA8MXJ8 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A23PA8MXZ1 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 ZIC3O60481 467 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A15PP0C7V4 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A13PP0C7W8 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A14PP0C7W9 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A24PP0C7X0 464 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM11P17152 192 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 CD33P20138 364 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 IL3RAP26951 378 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 C6orf15Q6UXA7 325 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-201ENST00000261646 PQLC2Q6ZP29 291 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 LYZL4Q96KX0 146 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 OTX1P32242 354 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-201ENST00000261646 NPVFQ9HCQ7 196 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 TMEM106BQ9NUM4 274 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 IGKV3D-11A0A0A0MRZ8 115 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 EREGO14944 169 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 OPRK1P41145 380 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 DMWDQ09019 674 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 GABRA6Q16445 453 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 OR2Z1Q8NG97 314 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 RNF2Q99496 336 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 TXNDC17Q9BRA2 123 aa13.85□□□□□ -0.19
SREBF1-201ENST00000261646 ABCA1O95477 2261 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 SERF1AO75920 110 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 DEFA4P12838 97 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 ATP5G3P48201 142 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 ZNF137PP52743 207 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 SPINK14Q6IE38 97 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 LRTM2Q8N967 370 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 FAM216AQ8WUB2 273 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 AKIRIN1Q9H9L7 192 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-201ENST00000261646 DPRXA6NFQ7 191 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 SLC25A45Q8N413 288 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 BEND2Q8NDZ0 799 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 FAM122AQ96E09 287 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 BRCA2P51587 3418 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 PGPEP1LA6NFU8 196 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 PATE3B3GLJ2 98 aa13.84□□□□□ -0.19
SREBF1-201ENST00000261646 RPL31P62899 125 aaKnown RBP13.84□□□□□ -0.19
SREBF1-201ENST00000261646 PMCHL1Q16048 86 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms