RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 PHOX2AO14813 284 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 IGKV1-39P01597 117 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 IGKV1D-39P04432 117 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 PRDX2P32119 198 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 ASCL4Q6XD76 172 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 COLCA1Q6ZS62 124 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 RPRMLQ8N4K4 120 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 TAF15Q92804 592 aaKnown RBP eCLIP7.47□□□□□ -1.21
PNPT1-201ENST00000260604 GMPPAQ96IJ6 420 aaPredicted RBP7.47□□□□□ -1.21
PNPT1-201ENST00000260604 PLSCR2Q9NRY7 297 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 GAR1Q9NY12 217 aaKnown RBP7.47□□□□□ -1.21
PNPT1-201ENST00000260604 RPH3ALQ9UNE2 315 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 TIMM8BQ9Y5J9 83 aaPredicted RBP7.47□□□□□ -1.21
PNPT1-201ENST00000260604 NCKAP5O14513 1909 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 TRAV17A0A0B4J275 112 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 CLDN14O95500 239 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 FTH1P19P0C7X4 201 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 BCL2P10415 239 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 EIF2S3P41091 472 aaKnown RBP7.47□□□□□ -1.21
PNPT1-201ENST00000260604 PAX9P55771 341 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 ZNF66Q6ZN08 573 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 OR13D1Q8NGV5 346 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 OR2V2Q96R30 315 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 S1PR3Q99500 378 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 SERTAD4Q9NUC0 356 aa7.47□□□□□ -1.21
PNPT1-201ENST00000260604 ENSAO43768 121 aaKnown RBP7.46□□□□□ -1.21
PNPT1-201ENST00000260604 CLN5O75503 358 aa7.46□□□□□ -1.21
PNPT1-201ENST00000260604 SPSB3Q6PJ21 355 aa7.46□□□□□ -1.21
PNPT1-201ENST00000260604 SNIP1Q8TAD8 396 aaKnown RBP7.46□□□□□ -1.21
PNPT1-201ENST00000260604 CREBBPQ92793 2442 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 PPP5D1E7EU14 171 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 CLDN34H7C241 214 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 COX5AP20674 150 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 COL8A2P25067 703 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 HOXA6P31267 233 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 SPNS3Q6ZMD2 512 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 Q8IYB0 196 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ZADH2Q8N4Q0 377 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 RAB24Q969Q5 203 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 FAM122AQ96E09 287 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ZNF251Q9BRH9 671 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 LRFN3Q9BTN0 628 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 QTRT1Q9BXR0 403 aaKnown RBP7.46□□□□□ -1.22
PNPT1-201ENST00000260604 HIPK2Q9H2X6 1198 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ZNRD1Q9P1U0 126 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 TMPRSS2O15393 492 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 MLNRO43193 412 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 IRF2P14316 349 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 MYOD1P15172 320 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 THBS3P49746 956 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 SLC35B1P78383 322 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 CHD3Q12873 2000 aaKnown RBP7.46□□□□□ -1.22
PNPT1-201ENST00000260604 TMEM241Q24JQ0 296 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.46□□□□□ -1.221e-8■■■■■ 31.9
PNPT1-201ENST00000260604 CLDND2Q8NHS1 167 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ITLN1Q8WWA0 313 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 CCL17Q92583 94 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 CCL13Q99616 98 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 ACTR3CQ9C0K3 210 aaPredicted RBP7.46□□□□□ -1.22
PNPT1-201ENST00000260604 CXXC4Q9H2H0 198 aa7.46□□□□□ -1.22
PNPT1-201ENST00000260604 OOEPA6NGQ2 149 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 MARCH11A6NNE9 402 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 CYB5R3P00387 301 aaPredicted RBP7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM27E3Q08E93 113 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 SSX7Q7RTT5 188 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 MRPL41Q8IXM3 137 aaKnown RBP7.45□□□□□ -1.22
PNPT1-201ENST00000260604 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 OR8G5Q8NG78 346 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 RHOVQ96L33 236 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 WT1P19544 449 aaPredicted RBP7.45□□□□□ -1.22
PNPT1-201ENST00000260604 GABRA6Q16445 453 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 MIC13Q5XKP0 118 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 Q6P435 159 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 PCGF1Q9BSM1 259 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 PLEKHA3Q9HB20 300 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 DECR2Q9NUI1 292 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A10PA6NDY2 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 BTBD17A6NE02 478 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A18PA6NE21 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A16PA6NEW6 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A20PA6NIJ5 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A8PA6NJQ4 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A7PA6NKC0 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A22PA8MWA6 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A12PA8MX19 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A5PA8MXJ8 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A23PA8MXZ1 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 GYPAP02724 150 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A15PP0C7V4 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A13PP0C7W8 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A14PP0C7W9 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM90A24PP0C7X0 464 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 BSXQ3C1V8 233 aa7.45□□□□□ -1.22
PNPT1-201ENST00000260604 FAM78BQ5VT40 261 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms