RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZNF585BQ52M93 769 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 BTNL3Q6UXE8 466 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 OR52M1Q8NGK5 317 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 RBPMSQ93062 196 aaKnown RBP14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF714Q96N38 554 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 ARL6Q9H0F7 186 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 GAL3ST2Q9H3Q3 398 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 NARFLQ9H6Q4 476 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 YAE1D1Q9NRH1 226 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 GSKIPQ9P0R6 139 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 MBD2Q9UBB5 411 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 RPUSD1Q9UJJ7 312 aaKnown RBP14.31□□□□□ -0.12
SRSF1-201ENST00000258962 TNFSF18Q9UNG2 199 aa14.31□□□□□ -0.12
SRSF1-201ENST00000258962 PROP1O75360 226 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 IGKV1-39P01597 117 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 IGKV1D-39P04432 117 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 DLX6P56179 175 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 KRTAP1-1Q07627 177 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 RAB32Q13637 225 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 Q3ZCU0 254 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 TMEM155Q4W5P6 130 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 NMSQ5H8A3 153 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 CT45A1Q5HYN5 189 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF680Q8NEM1 530 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 OR10A7Q8NGE5 316 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 CT45A3Q8NHU0 189 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 RNF126Q9BV68 326 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 UBQLN2Q9UHD9 624 aa14.3□□□□□ -0.12
SRSF1-201ENST00000258962 ZANQ9Y493 2812 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 KANTRA0A1W2PQU2 76 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 IGHV4-31P0DP07 118 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF16P17020 682 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-201ENST00000258962 GPR12P47775 334 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 RAB14P61106 215 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 HEPN1Q6WQI6 88 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 SLC51BQ86UW2 128 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 KCNRGQ8N5I3 272 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 SPIN2AQ99865 258 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 SPIN2BQ9BPZ2 258 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 ABHD14AQ9BUJ0 271 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 HEXA-AS1Q9H8Q6 139 aa14.29□□□□□ -0.12
SRSF1-201ENST00000258962 TRBV23-1A0A0A0MS06 115 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 A0A1W2PPE3 182 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 SERPINE2P07093 398 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 LYL1P12980 280 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 BRWD1-AS2P59051 145 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 C1orf229Q6ZS94 237 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-201ENST00000258962 CLDND2Q8NHS1 167 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 OR5AC2Q9NZP5 309 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 MIOXQ9UGB7 285 aa14.28□□□□□ -0.12
SRSF1-201ENST00000258962 A0A0G2JRQ6 117 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 RNF222A6NCQ9 220 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 LINC00473A8K010 186 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 S100A1P23297 94 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 GNG10P50151 68 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 RAB7AP51149 207 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 LINC00205P59089 165 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 CATR1Q13166 79 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 ODF3L1Q8IXM7 274 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 OR4D5Q8NGN0 318 aa14.27□□□□□ -0.12
SRSF1-201ENST00000258962 NEIL1Q96FI4 390 aaPredicted RBP14.27□□□□□ -0.12
SRSF1-201ENST00000258962 SETD2Q9BYW2 2564 aaPredicted RBP14.27□□□□□ -0.13
SRSF1-201ENST00000258962 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 TGFAP01135 160 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 VDAC1P21796 283 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 RPL39P5Q59GN2 51 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 OR2B11Q5JQS5 317 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 OR8B3Q8NGG8 313 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 TCTEX1D2Q8WW35 142 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 DCUN1D4Q92564 292 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 OR8B2Q96RD0 313 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 HSD17B10Q99714 261 aaKnown RBP14.26□□□□□ -0.13
SRSF1-201ENST00000258962 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
SRSF1-201ENST00000258962 INAFM1C9JVW0 142 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 F5H0A9 414 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 RAMP3O60896 148 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 IGKV1-5P01602 117 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 MBPP02686 304 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 DUTP33316 252 aaKnown RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 LPAR6P43657 344 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 RIPPLY3P57055 190 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 S100A10P60903 97 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 UBA52P62987 128 aaKnown RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 WDR25Q64LD2 544 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 SLC25A48Q6ZT89 311 aaKnown RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 C11orf42Q8N5U0 333 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 LINC01356Q8N9X3 169 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 OR1S1Q8NH92 325 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 RAB39BQ96DA2 213 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 ZNF251Q9BRH9 671 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 PATZ1Q9HBE1 687 aaKnown RBP14.25□□□□□ -0.13
SRSF1-201ENST00000258962 MALRD1Q5VYJ5 2156 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 SAA2-SAA4A0A096LPE2 208 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 K7EPK0 472 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 M0R1X1 148 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 GPR37O15354 613 aa14.25□□□□□ -0.13
SRSF1-201ENST00000258962 KCNAB3O43448 404 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms