RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RPL19P84098 196 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 OR51G1Q8NGK1 321 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 LRRC29Q8WV35 223 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 FAM103A1Q9BTL3 118 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 ELOVL1Q9BW60 279 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 CISD1Q9NZ45 108 aaKnown RBP4.02□□□□□ -1.77
USP44-201ENST00000258499 SH3BGRL2Q9UJC5 107 aa4.02□□□□□ -1.77
USP44-201ENST00000258499 IGHV3OR15-7A0A075B7D8 119 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ODAMA1E959 279 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZNF503-AS2A6NEH8 195 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SPRY3O43610 288 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 OR7C2O60412 319 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SP1P08047 785 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 RNF224P0DH78 156 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 WNT5AP41221 380 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 LHX2P50458 406 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 TFF3Q07654 80 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SMIM21Q3B7S5 101 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZNF718Q3SXZ3 478 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZNF324BQ6AW86 544 aaPredicted RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 DPPA3Q6W0C5 159 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SAXO1Q8IYX7 474 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 KDF1Q8NAX2 398 aaPredicted RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 R3HDM4Q96D70 268 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 S1PR3Q99500 378 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 TUBG2Q9NRH3 451 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 APC2O95996 2303 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 MED13LQ71F56 2210 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZNF729A6NN14 1252 aaPredicted RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 C17orf98A8MV24 154 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 FAM157AC9JC47 383 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 C12orf77C9JDV5 145 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 NEURL1O76050 574 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 IGHV2-5P01817 119 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PAX6P26367 422 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 DDTP30046 118 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 GNG10P50151 68 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PAX9P55771 341 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 CLDN18P56856 261 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SOX8P57073 446 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZFP36L1Q07352 338 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 LRRC75BQ2VPJ9 315 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ASCL4Q6XD76 172 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 RPP25LQ8N5L8 163 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 SGMS2Q8NHU3 365 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 LYPD6BQ8NI32 183 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 LEAP2Q969E1 77 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 TAAR6Q96RI8 345 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 CDX2Q99626 313 aaPredicted RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 CTDSP1Q9GZU7 261 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 RPH3ALQ9UNE2 315 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 WNK2Q9Y3S1 2297 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 HEATR1Q9H583 2144 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 A0A087WWC5 75 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PGPEP1LA6NFU8 196 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 C1QTNF9BB2RNN3 333 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 B4E171 279 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 DKK1O94907 266 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 MT-CO2P00403 227 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PLA2G5P39877 138 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 TSPAN7P41732 249 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 ZNF83P51522 516 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 UCP2P55851 309 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 GFRA1P56159 465 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PKIAP61925 76 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 SLC35B1P78383 322 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 COL10A1Q03692 680 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 GCSAMLQ5JQS6 135 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 PCSK4Q6UW60 755 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 TOMM20LQ6UXN7 152 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 Q6ZPA2 131 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 OR8G5Q8NG78 346 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 OR4X1Q8NH49 305 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 CA5BP1Q8WTZ4 195 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 RNF138Q8WVD3 245 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 EDARADDQ8WWZ3 215 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 LSM10Q969L4 123 aaKnown RBP4.01□□□□□ -1.77
USP44-201ENST00000258499 MS4A10Q96PG2 267 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 EGLN1Q9GZT9 426 aa4.01□□□□□ -1.77
USP44-201ENST00000258499 EML6Q6ZMW3 1958 aa4□□□□□ -1.77
USP44-201ENST00000258499 OOEPA6NGQ2 149 aa4□□□□□ -1.77
USP44-201ENST00000258499 KBTBD11O94819 623 aa4□□□□□ -1.77
USP44-201ENST00000258499 NDUFB7P17568 137 aa4□□□□□ -1.77
USP44-201ENST00000258499 HOXA6P31267 233 aa4□□□□□ -1.77
USP44-201ENST00000258499 TCL1AP56279 114 aa4□□□□□ -1.77
USP44-201ENST00000258499 ERVFC1-1P60608 527 aa4□□□□□ -1.77
USP44-201ENST00000258499 MIC13Q5XKP0 118 aa4□□□□□ -1.77
USP44-201ENST00000258499 FAM90A2PQ658T7 463 aa4□□□□□ -1.77
USP44-201ENST00000258499 LINC00596Q86U02 117 aa4□□□□□ -1.77
USP44-201ENST00000258499 LYG1Q8N1E2 194 aa4□□□□□ -1.77
USP44-201ENST00000258499 HIST3H2BBQ8N257 126 aa4□□□□□ -1.77
USP44-201ENST00000258499 OR1P1Q8NH06 330 aa4□□□□□ -1.77
USP44-201ENST00000258499 SPSB4Q96A44 273 aa4□□□□□ -1.77
USP44-201ENST00000258499 ZPBPQ9BS86 351 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms