RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LY96Q9Y6Y9 160 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 GOSR1O95249 250 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 BMI1P35226 326 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 CCL7P80098 99 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 TOMM20LQ6UXN7 152 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 TP53RKQ96S44 253 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 GPR35Q9HC97 309 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 HEYLQ9NQ87 328 aaPredicted RBP3.54□□□□□ -1.84
UBE4A-201ENST00000252108 ARL2-SNX15V9GYD0 113 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 CACNA1CQ13936 2221 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 CEP290O15078 2479 aa3.54□□□□□ -1.84
UBE4A-201ENST00000252108 IGHV3-20A0A0C4DH32 117 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OOEPA6NGQ2 149 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SLC22A20A6NK97 555 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SYNGR3O43761 229 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 RD3LP0DJH9 198 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 G0S2P27469 103 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CYB561P49447 251 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 GFRA1P56159 465 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 NMSQ5H8A3 153 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 TSPO2Q5TGU0 170 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SHISA6Q6ZSJ9 500 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF525Q8N782 197 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OR4X1Q8NH49 305 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 C14orf144Q96I85 54 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF665Q9H7R5 613 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 RPRMQ9NS64 109 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FUT9Q9Y231 359 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ADH4P08319 380 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 RAB7AP51149 207 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SPSB3Q6PJ21 355 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SMIM15Q7Z3B0 74 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF295-AS1Q8N0V1 137 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FBXO17Q96EF6 278 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 WDYHV1Q96HA8 205 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 HDHD3Q9BSH5 251 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM208Q9BTX3 173 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 UQCR10Q9UDW1 63 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 A0A1B0GV90 55 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FAM221AA4D161 298 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 B4GALT1P15291 398 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 IL3RAP26951 378 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 BRS3P32247 399 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FOXL1Q12952 345 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM249Q2WGJ8 235 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PIGYQ3MUY2 71 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CXorf66Q5JRM2 361 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 C1orf194Q5T5A4 169 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PRAMEF5Q5TYX0 476 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PRAMEF6Q5VXH4 476 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 DTD1Q8TEA8 209 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 C1QTNF5Q9BXJ0 243 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 IGKV1D-8A0A087WSZ0 117 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PPIHO43447 177 aaKnown RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CXCL13O43927 109 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 GDF9O60383 454 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 HLA-DQA1P01909 254 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OR3A1P47881 315 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ERVS71-1P61550 626 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 NECAP1Q8NC96 275 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OR5T1Q8NG75 326 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OR5B3Q8NH48 314 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 RAB1CQ92928 201 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PARLQ9H300 379 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 GLRX2Q9NS18 164 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PPP1R3CQ9UQK1 317 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 TIMM8BQ9Y5J9 83 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 KALRNO60229 2985 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 A0A1W2PPE3 182 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 TIMM8AO60220 97 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 WDR1O75083 606 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 MMP23AO75900 390 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CLDN14O95500 239 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF25P17030 456 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CEACAM6P40199 344 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 PCP4P48539 62 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 SUB1P53999 127 aaKnown RBP eCLIP3.53□□□□□ -1.841e-6■■■■■ 30.7
UBE4A-201ENST00000252108 GAGE1Q13065 139 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 RNF151Q2KHN1 245 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 CLEC2AQ6UVW9 174 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 C1QL2Q7Z5L3 287 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF418Q8TF45 676 aaPredicted RBP3.53□□□□□ -1.84
UBE4A-201ENST00000252108 FAM173AQ9BQD7 235 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 GP6Q9HCN6 339 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 OBP2BQ9NPH6 170 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 LOXL2Q9Y4K0 774 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 WIPI2Q9Y4P8 454 aa3.53□□□□□ -1.84
UBE4A-201ENST00000252108 MYO7BQ6PIF6 2116 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV3D-15A0A087WSY6 115 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 TRBV23-1A0A0A0MS06 115 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 KIAA1324LA8MWY0 1029 aaPredicted RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 C9JQL5 133 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 J3QKU1 62 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 CCL21O00585 134 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GLI4P10075 376 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 FHITP49789 147 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RPS16P62249 146 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms