RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 KIAA1456Q9P272 454 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 CLN8Q9UBY8 286 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 MARCH11A6NNE9 402 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 SLC38A11Q08AI6 406 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 RARRES2Q99969 163 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 BSNQ9UPA5 3926 aa20.86■□□□□ 0.93
TMEM55B-201ENST00000250489 RBFOX3A6NFN3 312 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 DSCAMO60469 2012 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 DEFB108BQ8NET1 73 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 R3HDM4Q96D70 268 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 WDR61Q9GZS3 305 aaKnown RBP20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 NDRG3Q9UGV2 375 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 M0R1X1 148 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 IGHV3-7P01780 117 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 BSPH1Q075Z2 132 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 ADIPOQQ15848 244 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 HFEQ30201 348 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 DTD1Q8TEA8 209 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 SFT2D1Q8WV19 159 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 RAB9BQ9NP90 201 aa20.85■□□□□ 0.93
TMEM55B-201ENST00000250489 ITGB1BP1O14713 200 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 ZG16O60844 167 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 FCGR3BO75015 233 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 RPL39P5Q59GN2 51 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 OR8G2PQ6IF36 304 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 ZNF788Q6ZQV5 615 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 TGIF2LYQ8IUE0 185 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 ZNF665Q9H7R5 613 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 PTPRZ1P23471 2315 aaPredicted RBP20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 ZGRF1Q86YA3 2104 aa20.84■□□□□ 0.93
TMEM55B-201ENST00000250489 ACACAQ13085 2346 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 KBTBD11-OT1A0A1B0GTJ5 212 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 SLC31A2O15432 143 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 HBE1P02100 147 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 OR4A8P0C604 315 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 UTF1Q5T230 341 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 ZDHHC16Q969W1 377 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 CCL13Q99616 98 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 GFOD1Q9NXC2 390 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 DCAF16Q9NXF7 216 aa20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 RAI1Q7Z5J4 1906 aaPredicted RBP20.83■□□□□ 0.93
TMEM55B-201ENST00000250489 DIDO1Q9BTC0 2240 aaKnown RBP20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 HPRT1P00492 218 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 GYPAP02724 150 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 IRF2P14316 349 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 TEX36Q5VZQ5 186 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 KDF1Q8NAX2 398 aaPredicted RBP20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 FAM234AQ9H0X4 552 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 RPRMQ9NS64 109 aa20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 RP1L1Q8IWN7 2480 aaPredicted RBP20.83■□□□□ 0.92
TMEM55B-201ENST00000250489 TRGV10A0A0A0MS01 117 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 CD55P08174 381 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 SMUG1Q53HV7 270 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 SSX8Q7RTT4 187 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 TCF23Q7RTU1 214 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 FAM216BQ8N7L0 139 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 CIB3Q96Q77 187 aaPredicted RBP20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 DIRC2Q96SL1 478 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 GAB2Q9UQC2 676 aa20.82■□□□□ 0.92
TMEM55B-201ENST00000250489 TRAV1-1A0A0B4J248 108 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 UBE2L5PA0A1B0GUS4 154 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 PMS2P5A8MQ11 134 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 RBFOX2O43251 390 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 RBMXL2O75526 392 aaKnown RBP20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 OR9G9P0C7N8 305 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 OR13C7P0DN81 318 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 RAB7AP51149 207 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 RAB2AP61019 212 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 CCL8P80075 99 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 SERF2P84101 59 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 ETV3LQ6ZN32 361 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 TAF15Q92804 592 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 RBMXL1Q96E39 390 aaKnown RBP20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 VSIRQ9H7M9 311 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 C17orf100A8MU93 164 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 AWAT1Q58HT5 328 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 LEAP2Q969E1 77 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 PLCE1Q9P212 2302 aa20.81■□□□□ 0.92
TMEM55B-201ENST00000250489 FAM87AP0C7U9 286 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 TNFRSF1AP19438 455 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 HAGHQ16775 308 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 ATP6V1FQ16864 119 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 AARDQ4LEZ3 155 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 AKIRIN2Q53H80 203 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 QTRT1Q9BXR0 403 aaKnown RBP20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 ATMQ13315 3056 aa20.8■□□□□ 0.92
TMEM55B-201ENST00000250489 SPTBN2O15020 2390 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 FAM90A9PA6NNJ1 464 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 CEBPZOSA8MTT3 80 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 CT45A1Q5HYN5 189 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 ZNF506Q5JVG8 444 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 C1orf229Q6ZS94 237 aaPredicted RBP20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 CLDND2Q8NHS1 167 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 CT45A3Q8NHU0 189 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 AIFM2Q9BRQ8 373 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 SMCO4Q9NRQ5 59 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 PRELID3BQ9Y3B1 194 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 MSRB2Q9Y3D2 182 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 DYSFO75923 2080 aa20.79■□□□□ 0.92
TMEM55B-201ENST00000250489 DSCAML1Q8TD84 2053 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms