RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HES4Q9HCC6 221 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 WIPI2Q9Y4P8 454 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 RELNP78509 3460 aa13.21□□□□□ -0.3
LRFN1-201ENST00000248668 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 C22orf34Q6ZV56 151 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 THNSL2Q86YJ6 484 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 C1orf162Q8NEQ5 155 aaPredicted RBP13.2□□□□□ -0.3
LRFN1-201ENST00000248668 FAM234AQ9H0X4 552 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 URGCP-MRPS24S4R325 110 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 DUXBA0A1W2PPF3 345 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 CEACAM4O75871 244 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 REC114Q7Z4M0 266 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 CD177Q8N6Q3 437 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 RSG1Q9BU20 258 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 LIN7CQ9NUP9 197 aaKnown RBP13.2□□□□□ -0.3
LRFN1-201ENST00000248668 A0A1B0GU03 582 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 FAM157AC9JC47 383 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 K7N7A8 449 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 IGLV1-44P01699 117 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 RPL23AP62750 156 aaKnown RBP13.2□□□□□ -0.3
LRFN1-201ENST00000248668 FGFRL1Q8N441 504 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 IL22RA2Q969J5 263 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 GAR1Q9NY12 217 aaKnown RBP13.2□□□□□ -0.3
LRFN1-201ENST00000248668 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
LRFN1-201ENST00000248668 SYNGR2O43760 224 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 FAM27E3Q08E93 113 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 HAGHQ16775 308 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 SMIM21Q3B7S5 101 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 PSENENQ9NZ42 101 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
LRFN1-201ENST00000248668 NPIPB11E5RHQ5 1161 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 RBMXL2O75526 392 aaKnown RBP13.19□□□□□ -0.3
LRFN1-201ENST00000248668 KITLGP21583 273 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 P2RY6Q15077 328 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 MOGAT3Q86VF5 341 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 RBMXL3Q8N7X1 1067 aaKnown RBP13.19□□□□□ -0.3
LRFN1-201ENST00000248668 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
LRFN1-201ENST00000248668 MAJINQ3KP22 176 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 SNIP1Q8TAD8 396 aaKnown RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 OR2V2Q96R30 315 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 SPTBN1Q01082 2364 aaKnown RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 MBD3L4A6NDZ8 208 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 MBD3L3A6NE82 208 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 MBD3L5A6NJ08 208 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 MBD3L2Q8NHZ7 208 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 OOEPA6NGQ2 149 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 ATXN7O15265 892 aaPredicted RBP13.18□□□□□ -0.3
LRFN1-201ENST00000248668 S1PR2O95136 353 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 CEACAM1P13688 526 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 PRDX2P32119 198 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 EDDM3BP56851 147 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 ATP5SQ99766 215 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 GPR61Q9BZJ8 451 aa13.18□□□□□ -0.3
LRFN1-201ENST00000248668 FABP4P15090 132 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 SULT1A1P50225 295 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 AKR1C8PQ5T2L2 129 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 DOK5Q9P104 306 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
LRFN1-201ENST00000248668 CLDN1O95832 211 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 CRYAAP02489 173 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 C4orf17Q53FE4 359 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 SPNS3Q6ZMD2 512 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 ZNF645Q8N7E2 425 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 SLC35E4Q6ICL7 350 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 Q6ZS92 163 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
LRFN1-201ENST00000248668 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 HOXA5P20719 270 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 LMO1P25800 156 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 LEAP2Q969E1 77 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 IGKV1D-17A0A075B6S4 117 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 TLE1Q04724 770 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
LRFN1-201ENST00000248668 VSIRQ9H7M9 311 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 SIRT7Q9NRC8 400 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
LRFN1-201ENST00000248668 IFNA5P01569 189 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 BAXQ07812 192 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 UTF1Q5T230 341 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 DUX4L9Q6RFH8 374 aaPredicted RBP13.15□□□□□ -0.3
LRFN1-201ENST00000248668 HAPLN4Q86UW8 402 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 ITLN1Q8WWA0 313 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
LRFN1-201ENST00000248668 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
LRFN1-201ENST00000248668 LINC00473A8K010 186 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms