RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CD81P60033 236 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 EIF4EBP1Q13541 118 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-201ENST00000248139 DTD1Q8TEA8 209 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 SDF2L1Q9HCN8 221 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 VAX2Q9UIW0 290 aa21.34■■□□□ 1.01
RAB40C-201ENST00000248139 TMEM210A6NLX4 147 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 IGKV3-15P01624 115 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 HOXA5P20719 270 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 FGF7P21781 194 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 SLC35E4Q6ICL7 350 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 CD177Q8N6Q3 437 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 J3QW42 95 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 P0C879 139 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 SPRNQ5BIV9 151 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 CXXC4Q9H2H0 198 aa21.33■■□□□ 1.01
RAB40C-201ENST00000248139 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.33■■□□□ 1.01
RAB40C-201ENST00000248139 ADIRFQ15847 76 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 LRP11Q86VZ4 500 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 VKORC1L1Q8N0U8 176 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 FAM210BQ96KR6 192 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 DUSP13Q9UII6 198 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 IGHV3OR15-7A0A075B7D8 119 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 PIGBOS1A0A0B4J2F0 54 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 S100A12P80511 92 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 H2BFWTQ7Z2G1 175 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 MRGPRGQ86SM5 289 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 ABHD5Q8WTS1 349 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 FRZBQ92765 325 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 GGACTQ9BVM4 153 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.32■■□□□ 1
RAB40C-201ENST00000248139 SPAARA0A1B0GVQ0 90 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 C1QTNF9BB2RNN3 333 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 EGR1P18146 543 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 MSMPQ1L6U9 139 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 UTF1Q5T230 341 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 WDR25Q64LD2 544 aaPredicted RBP21.32■■□□□ 1
RAB40C-201ENST00000248139 NCR3LG1Q68D85 454 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 LRRC29Q8WV35 223 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 EDARADDQ8WWZ3 215 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 TOLLIPQ9H0E2 274 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 SIRT7Q9NRC8 400 aa21.32■■□□□ 1
RAB40C-201ENST00000248139 PMS2P5A8MQ11 134 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 MSMO1Q15800 293 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 SMIM7Q9BQ49 75 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 TRAV20A0A0B4J274 112 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 FFAR4Q5NUL3 377 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 OR2Z1Q8NG97 314 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 OR10G4Q8NGN3 311 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 GPR61Q9BZJ8 451 aa21.31■■□□□ 1
RAB40C-201ENST00000248139 PROP1O75360 226 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 SOD3P08294 240 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 CATR1Q13166 79 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 GCSAMLQ5JQS6 135 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 OR10G9Q8NGN4 311 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 OR10G7Q8NGN6 311 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 QTRT1Q9BXR0 403 aaKnown RBP21.3■■□□□ 1
RAB40C-201ENST00000248139 TRGC1P0CF51 173 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 COL8A2P25067 703 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 RTP5Q14D33 572 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 PYY3Q5JQD4 70 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 PINX1Q96BK5 328 aaKnown RBP21.3■■□□□ 1
RAB40C-201ENST00000248139 HCFC1P51610 2035 aa21.3■■□□□ 1
RAB40C-201ENST00000248139 FAM90A26D6RGX4 464 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 CYB5R3P00387 301 aaPredicted RBP21.29■■□□□ 1
RAB40C-201ENST00000248139 GUSBP1Q15486 140 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 OR10P1Q8NGE3 313 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 LOXL4Q96JB6 756 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 TCEAL7Q9BRU2 100 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 OTOGLQ3ZCN5 2332 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 CXorf65A6NEN9 183 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 CLDN34H7C241 214 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 IGHG3P01860 377 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 CDX1P47902 265 aaPredicted RBP21.29■■□□□ 1
RAB40C-201ENST00000248139 DEFB124Q8NES8 71 aa21.29■■□□□ 1
RAB40C-201ENST00000248139 DMXL2Q8TDJ6 3036 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 IGHV1-18A0A0C4DH31 117 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 MARCH11A6NNE9 402 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 OR9G9P0C7N8 305 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 GCH1P30793 250 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 MEF2BQ02080 365 aaPredicted RBP21.28■■□□□ 1
RAB40C-201ENST00000248139 OR5T1Q8NG75 326 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 LEAP2Q969E1 77 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 AGMATQ9BSE5 352 aa21.28■■□□□ 1
RAB40C-201ENST00000248139 IGHV2OR16-5A0A0B4J2B6 119 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 FCGR3BO75015 233 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 FAM201AQ5SY85 155 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 TMEM147Q9BVK8 224 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 ATMQ13315 3056 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 CLDN14O95500 239 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 COX5AP20674 150 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 PRDX2P32119 198 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 VHLLQ6RSH7 139 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 C1orf87Q8N0U7 546 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 ZBTB34Q8NCN2 500 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 ZNRF1Q8ND25 227 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 OR10D4PQ8NGN7 298 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 OR4F5Q8NH21 305 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 RAB24Q969Q5 203 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 OR4F4Q96R69 305 aa21.27■■□□□ 1
RAB40C-201ENST00000248139 OR51M1Q9H341 326 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms