RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 HSPB1P04792 205 aaKnown RBP13.5□□□□□ -0.25
SIN3B-201ENST00000248054 UNC119Q13432 240 aa13.5□□□□□ -0.25
SIN3B-201ENST00000248054 MISP3Q96FF7 219 aa13.5□□□□□ -0.25
SIN3B-201ENST00000248054 DEPPQ9NTK1 212 aa13.5□□□□□ -0.25
SIN3B-201ENST00000248054 AGAP20933 346 aa13.5□□□□□ -0.25
SIN3B-201ENST00000248054 FGF8P55075 233 aaPredicted RBP13.5□□□□□ -0.25
SIN3B-201ENST00000248054 RPL11P62913 178 aaKnown RBP13.5□□□□□ -0.25
SIN3B-201ENST00000248054 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
SIN3B-201ENST00000248054 LOC102723971A0A1B0GUV8 181 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 LY6G6FQ5SQ64 297 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 ZNF552Q9H707 407 aaPredicted RBP13.49□□□□□ -0.25
SIN3B-201ENST00000248054 CLDN16Q9Y5I7 305 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 MPDU1O75352 247 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 C1QL1O75973 258 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 GNB2P62879 340 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 ZNF343Q6P1L6 599 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 FGF16O43320 207 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
SIN3B-201ENST00000248054 BCL2P10415 239 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 E9PQ18 207 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 OR10J1P30954 320 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 RNASEKQ6P5S7 137 aaKnown RBP13.49□□□□□ -0.25
SIN3B-201ENST00000248054 OR1A1Q9P1Q5 309 aa13.49□□□□□ -0.25
SIN3B-201ENST00000248054 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
SIN3B-201ENST00000248054 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
SIN3B-201ENST00000248054 EFNA2O43921 213 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 DMRTA1Q5VZB9 504 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 GTF2H5Q6ZYL4 71 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 P2RX4Q99571 388 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 DOCK8Q8NF50 2099 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 SELLP14151 372 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
SIN3B-201ENST00000248054 ANKRD55Q3KP44 614 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 SLC25A10Q9UBX3 287 aaPredicted RBP13.48□□□□□ -0.25
SIN3B-201ENST00000248054 GLRXP35754 106 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 ERVS71-1P61550 626 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 HPRT1P00492 218 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 MPV17P39210 176 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 KLRB1Q12918 225 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 TUBD1Q9UJT1 453 aa13.48□□□□□ -0.25
SIN3B-201ENST00000248054 FAM90A26D6RGX4 464 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 RAB29O14966 203 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 SMPD2O60906 423 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 HBZP02008 142 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 GYPAP02724 150 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 KLK2P20151 261 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ELOBQ15370 118 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 HLA-DRB5Q30154 266 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ACSF3Q4G176 576 aaPredicted RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 MRPL30Q8TCC3 161 aaKnown RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 MRGPRFQ96AM1 343 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 TMEM191AQ9H0A3 160 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ZNF645Q8N7E2 425 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 GSX1Q9H4S2 264 aaPredicted RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 MSGN1A6NI15 193 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 PSG2P11465 335 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ASPHD2Q6ICH7 369 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 TUBA4BQ9H853 241 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 MDC1Q14676 2089 aaKnown RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 ETV2O00321 342 aaPredicted RBP13.47□□□□□ -0.25
SIN3B-201ENST00000248054 AMTP48728 403 aa13.47□□□□□ -0.25
SIN3B-201ENST00000248054 PRR32B1ATL7 298 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 SCTP09683 121 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 USF1P22415 310 aaPredicted RBP13.46□□□□□ -0.25
SIN3B-201ENST00000248054 HTR1DP28221 377 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 RPL31P62899 125 aaKnown RBP13.46□□□□□ -0.25
SIN3B-201ENST00000248054 TNFRSF9Q07011 255 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 ACSM6Q6P461 480 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 OR10C1Q96KK4 312 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 M0QZ24 198 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 TGIF2LYQ8IUE0 185 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 C5orf66Q9H5L9 145 aa13.46□□□□□ -0.25
SIN3B-201ENST00000248054 IGSF23A1L1A6 192 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 GCGP01275 180 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 FCER1GP30273 86 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 GGNQ86UU5 652 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 H0YL77 283 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 RBP4P02753 201 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 SMIM17P0DL12 118 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 C11orf42Q8N5U0 333 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 ZIC4Q8N9L1 334 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 PERPQ96FX8 193 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 ABHD14AQ9BUJ0 271 aa13.46□□□□□ -0.26
SIN3B-201ENST00000248054 TMEM11P17152 192 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 PAFAH1B2P68402 229 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 SLC35E4Q6ICL7 350 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 ZNF880Q6PDB4 577 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 TMEM252Q8N6L7 170 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 TRAV34A0A0B4J273 112 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
SIN3B-201ENST00000248054 PPP1CCP36873 323 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms